RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 HOXB13Q92826 284 aaPredicted RBP6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 CYFIP2Q96F07 1278 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 COQ10AQ96MF6 247 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 FTHL17Q9BXU8 183 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 DNAI2Q9GZS0 605 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 LHX5Q9H2C1 402 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 MANSC1Q9H8J5 431 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 ERVK-5Q9HDB9 667 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 C1orf112Q9NSG2 853 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 KLHL11Q9NVR0 708 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 GDAP2Q9NXN4 497 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 NOCTQ9UK39 431 aaKnown RBP6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 ST3GAL5Q9UNP4 418 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 JRKLQ9Y4A0 524 aa6.12□□□□□ -1.43
CDKN1B-204ENST00000477087 DOCK3Q8IZD9 2030 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 PTPRJQ12913 1337 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 CTIFO43310 598 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 TACC1O75410 805 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 SPDEFO95238 335 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 LSM8O95777 96 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 TUBBP07437 444 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 PLEKP08567 350 aaPredicted RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 TMEM191BP0C7N4 346 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ITGAMP11215 1152 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ATF7P17544 494 aaPredicted RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 CHRNB2P17787 502 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 CASQ1P31415 396 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ADRA1BP35368 520 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ERVK-21P61565 698 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 NOP14P78316 857 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 GFPT1Q06210 699 aaPredicted RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 MYO1EQ12965 1108 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 KLF1Q13351 362 aaPredicted RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 BIRC3Q13489 604 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 TMEM132DQ14C87 1099 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 UBXN2BQ14CS0 331 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 CLUL1Q15846 466 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 PTGISQ16647 500 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 TDRD12Q587J7 1177 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 FBXO47Q5MNV8 452 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 DNTTIP2Q5QJE6 756 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ACAD10Q6JQN1 1059 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ANKRD33Q7Z3H0 272 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 KIAA1328Q86T90 577 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 FAM228AQ86W67 206 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 PHF13Q86YI8 300 aaPredicted RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 EFCAB13Q8IY85 973 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 SYCE1Q8N0S2 351 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 CRYBG2Q8N1P7 616 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 C17orf53Q8N3J3 647 aaPredicted RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ACRBPQ8NEB7 543 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 BEST2Q8NFU1 509 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 MYRIPQ8NFW9 859 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 SECISBP2LQ93073 1101 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 RPGRIP1Q96KN7 1286 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 SNX27Q96L92 541 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ADAM2Q99965 735 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 DESI2Q9BSY9 194 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 FAM49AQ9H0Q0 323 aaPredicted RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ELAC1Q9H777 363 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 APOBEC3GQ9HC16 384 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 SLC38A7Q9NVC3 462 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 TESQ9UGI8 421 aaKnown RBP6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 SIX4Q9UIU6 781 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 CDC23Q9UJX2 597 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 TRIM17Q9Y577 477 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 ACTL7AQ9Y615 435 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 PLXNA1Q9UIW2 1896 aa6.11□□□□□ -1.43
CDKN1B-204ENST00000477087 CASP8AP2Q9UKL3 1982 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 SCN10AQ9Y5Y9 1956 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 SMIM28A0A1B0GU29 152 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 CTAGE9A4FU28 777 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 MARCH11A6NNE9 402 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 CYP1A2P05177 515 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 CXCL8P10145 99 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 TCP1P17987 556 aaKnown RBP6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 PIK3CAP42336 1068 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 PDE6CP51160 858 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 GALCP54803 685 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 GSCP56915 257 aaPredicted RBP6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 MYL6P60660 151 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 GPC5P78333 572 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 TFAMQ00059 246 aaKnown RBP6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 FMO1Q01740 532 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 BFSP2Q13515 415 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 CNGA2Q16280 664 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 ERCC6LQ2NKX8 1250 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 ZNF667Q5HYK9 610 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 EGFLAMQ63HQ2 1017 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 JADE1Q6IE81 842 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 GJB7Q6PEY0 223 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 SYT10Q6XYQ8 523 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 TMEM132CQ8N3T6 1108 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 LNX1Q8TBB1 728 aaPredicted RBP6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 ZNF606Q8WXB4 792 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 ASB10Q8WXI3 467 aa6.1□□□□□ -1.43
CDKN1B-204ENST00000477087 RFFLQ8WZ73 363 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms