RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 LIPNQ5VXI9 398 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 DENND5AQ6IQ26 1287 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 ERN2Q76MJ5 926 aaKnown RBP6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 TMCO2Q7Z6W1 182 aaPredicted RBP6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 PATL1Q86TB9 770 aaKnown RBP6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 LDHDQ86WU2 507 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 FAM131BQ86XD5 332 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 CACNA2D3Q8IZS8 1091 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 PYROXD2Q8N2H3 581 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 SRBD1Q8N5C6 995 aaKnown RBP6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 OR8J1Q8NGP2 316 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 FAM71BQ8TC56 605 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 RHPN1Q8TCX5 695 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 MCOLN3Q8TDD5 553 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 SLC20A1Q8WUM9 679 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 TRAPPC12Q8WVT3 735 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 TNFRSF14Q92956 283 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 ELMO3Q96BJ8 720 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 SGF29Q96ES7 293 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 NSMCE2Q96MF7 247 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 C5orf34Q96MH7 638 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 SPATA13Q96N96 652 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 VRK1Q99986 396 aaPredicted RBP6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 MCMBPQ9BTE3 642 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 OR51B5Q9H339 312 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 TCF7L1Q9HCS4 588 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 INTS13Q9NVM9 706 aa6.04□□□□□ -1.44
SPTLC3-205ENST00000476791 GRIN2BQ13224 1484 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 BTBD17A6NE02 478 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 TRPC5OSA6NMA1 111 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 AGAP14A8MT82 685 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 TRAF5O00463 557 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 CLDN4O14493 209 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 NDUFS2O75306 463 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 VNN2O95498 520 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 HRGP04196 525 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 CD63P08962 238 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 GAAP10253 952 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 FGFR1P11362 822 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 IL1R1P14778 569 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 ADRA1DP25100 572 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 CCND2P30279 289 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 MAT2AP31153 395 aaKnown RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 HTR7P34969 479 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 KIR3DL2P43630 455 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 IRAK1P51617 712 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 CCR5P51681 352 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 EPHB4P54760 987 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 NAA20P61599 178 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 CYP27A1Q02318 531 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 PPATQ06203 517 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 GTF2H3Q13889 308 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 TRIP13Q15645 432 aaPredicted RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 EDRF1Q3B7T1 1238 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 TIGD2Q4W5G0 525 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 ATXN7L2Q5T6C5 722 aaPredicted RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 USP49Q70CQ1 688 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 MAEAQ7L5Y9 396 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 OFCC1Q8IZS5 231 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 RBBP8NLQ8NC74 664 aaPredicted RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 FIBINQ8TAL6 211 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 CAPSLQ8WWF8 208 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 MCRS1Q96EZ8 462 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 HMCESQ96FZ2 354 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 FAM129BQ96TA1 746 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 PELOQ9BRX2 385 aaKnown RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 ZSCAN5AQ9BUG6 496 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 SPATA16Q9BXB7 569 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 ZNF717Q9BY31 904 aaPredicted RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 PUS7LQ9H0K6 701 aaKnown RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 NAPBQ9H115 298 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 NARFLQ9H6Q4 476 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 COPS7BQ9H9Q2 264 aaPredicted RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 ZMAT3Q9HA38 289 aaKnown RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 THG1LQ9NWX6 298 aaKnown RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 AGO1Q9UL18 857 aaKnown RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 SCML1Q9UN30 329 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 RPH3ALQ9UNE2 315 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 IFT52Q9Y366 437 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 KLF2Q9Y5W3 355 aaPredicted RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 KDM6BO15054 1643 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 MN1Q10571 1320 aaPredicted RBP6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 OR2AG2A6NM03 316 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 RHPN2P1A8MT19 583 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 TOR1AO14656 332 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 BET1O15155 118 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 SPAG6O75602 509 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 PPM1BO75688 479 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 DHFRP00374 187 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 FABP1P07148 127 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 CALB2P22676 271 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 RRM2P31350 389 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 PHBP35232 272 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 RASSF2P50749 326 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 SEC24CP53992 1094 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 GNG2P59768 71 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 TLE2Q04725 743 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 TNP2Q05952 138 aa6.03□□□□□ -1.44
SPTLC3-205ENST00000476791 PAK1Q13153 545 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms