RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ANKRD10Q9NXR5 420 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 SAGE1Q9NXZ1 904 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 MPP6Q9NZW5 540 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 HDAC6Q9UBN7 1215 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 HSF4Q9ULV5 492 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 PAM16Q9Y3D7 125 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 RAI2Q9Y5P3 530 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TARSL2A2RTX5 802 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TNFRSF13BO14836 293 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 CLDN7O95471 211 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 POLBP06746 335 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 HOXB5P09067 269 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC2A4P14672 509 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 CNTFP26441 200 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 CHATP28329 748 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 LIFRP42702 1097 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 PAFAH1B1P43034 410 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 CDH15P55291 814 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 ECT2LQ008S8 904 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC18A2Q05940 514 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TBX2Q13207 712 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 SERTAD4-AS1Q5TG53 156 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 NUGGCQ68CJ6 796 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 CCDC70Q6NSX1 233 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TMEM71Q6P5X7 295 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 KLHL24Q6TFL4 600 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 Q6ZTK2 550 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TRILQ7L0X0 811 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 MON1BQ7L1V2 547 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TRIM74Q86UV6 250 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TRIM73Q86UV7 250 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 ARMC8Q8IUR7 673 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 SFTPA2Q8IWL1 248 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 SAMD14Q8IZD0 417 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 ESX1Q8N693 406 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 ZBTB8BQ8NAP8 495 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 GDPD5Q8WTR4 605 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 ATOH1Q92858 354 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 PPM1MQ96MI6 270 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 NTPCRQ9BSD7 190 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 PHF7Q9BWX1 381 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 CXorf56Q9H5V9 222 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 WDR6Q9NNW5 1121 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 BABAM1Q9NWV8 329 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 WWOXQ9NZC7 414 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 KIAA1456Q9P272 454 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 NLKQ9UBE8 527 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC25A10Q9UBX3 287 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 CARD8Q9Y2G2 431 aa3.46□□□□□ -1.86
ECHDC1-213ENST00000474240 TYW5A2RUC4 315 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 DDTLA6NHG4 134 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 CHL1O00533 1208 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 SOX30O94993 753 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 HNRNPA1P09651 372 aaKnown RBP eCLIP3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 COX7A2P14406 83 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 GPTP24298 496 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 FMO4P31512 558 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 DCTDP32321 178 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 DDIT3P35638 169 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 MLH1P40692 756 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 PTPN9P43378 593 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 PPP3CCP48454 512 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 NUDT6P53370 316 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 ADORA2A-AS1P86434 159 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 EFNB1P98172 346 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 CYP4A11Q02928 519 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 RUNX2Q13950 521 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 TAF11Q15544 211 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 HIST2H2ACQ16777 129 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 FNBP1LQ5T0N5 605 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 NAPEPLDQ6IQ20 393 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 TMEM81Q6P7N7 255 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 INO80CQ6PI98 192 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 TADA2BQ86TJ2 420 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 TBC1D26Q86UD7 250 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 FAM160B2Q86V87 743 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 MON1AQ86VX9 555 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 FBXL14Q8N1E6 418 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 NFKBIDQ8NI38 313 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 RUFY2Q8WXA3 655 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 HVCN1Q96D96 273 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 SAAL1Q96ER3 474 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 APOPT1Q96IL0 206 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 SEC62Q99442 399 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 CLSTN3Q9BQT9 956 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 UBN1Q9NPG3 1134 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 TLR8Q9NR97 1041 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 KCND2Q9NZV8 630 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 PEMTQ9UBM1 199 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 ZNF69Q9UC07 566 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 MYO6Q9UM54 1294 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 PCDHA7Q9UN72 937 aa3.45□□□□□ -1.86
ECHDC1-213ENST00000474240 CCDC189A1A4V9 331 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 CBY3A6NI87 242 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 LACTBL1A8MY62 500 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 ERVV-2B6SEH9 535 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 TAF4O00268 1085 aa3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 TNPO2O14787 897 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-213ENST00000474240 RGS14O43566 566 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms