RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SHBQ15464 509 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 DPYSL2Q16555 572 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
CKS1B-206ENST00000474215 INAVAQ3KP66 663 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 KIAA1161Q6NSJ0 714 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 TTC7BQ86TV6 843 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 ZSCAN30Q86W11 494 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 OXR1Q8N573 874 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 LZTR1Q8N653 840 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 TMEM145Q8NBT3 493 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 RNF214Q8ND24 703 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 SAP25Q8TEE9 199 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 TEKT4Q8WW24 435 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 HSPH1Q92598 858 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 ARHGEF26Q96DR7 871 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 BTBD6Q96KE9 485 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 MYOCQ99972 504 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 SCNM1Q9BWG6 230 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 C1QTNF2Q9BXJ5 285 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 SLC17A9Q9BYT1 436 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 CPEB1Q9BZB8 566 aaKnown RBP11.34□□□□□ -0.59
CKS1B-206ENST00000474215 ZNHIT6Q9NWK9 470 aaKnown RBP11.34□□□□□ -0.59
CKS1B-206ENST00000474215 LHX3Q9UBR4 397 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 NENFQ9UMX5 172 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 APOBEC2Q9Y235 224 aaKnown RBP11.34□□□□□ -0.59
CKS1B-206ENST00000474215 CA5BQ9Y2D0 317 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 PLXNA2O75051 1894 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 DFFAO00273 331 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 NEMP1O14524 444 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 AREL1O15033 823 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 HYAL3O43820 417 aaPredicted RBP11.33□□□□□ -0.6
CKS1B-206ENST00000474215 PALMO75781 387 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 PAK4O96013 591 aaPredicted RBP11.33□□□□□ -0.6
CKS1B-206ENST00000474215 ITGAVP06756 1048 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 TPM1P09493 284 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 FTH1P19P0C7X4 201 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 THEGLP0DJG4 465 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 ABL2P42684 1182 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 GRM3Q14832 879 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 SLC18A3Q16572 532 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 SMTNL2Q2TAL5 461 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 ASTE1Q2TB18 679 aaPredicted RBP11.33□□□□□ -0.6
CKS1B-206ENST00000474215 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 POLNQ7Z5Q5 900 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 RAB44Q7Z6P3 723 aaPredicted RBP11.33□□□□□ -0.6
CKS1B-206ENST00000474215 SLCO6A1Q86UG4 719 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 GATAD2AQ86YP4 633 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 VSTM4Q8IW00 320 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 ARHGAP12Q8IWW6 846 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 CHCHD4Q8N4Q1 142 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 NPWQ8N729 165 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 PNPLA1Q8N8W4 532 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 FAM174AQ8TBP5 190 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 HCAR2Q8TDS4 363 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 ADAMTS14Q8WXS8 1223 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.33□□□□□ -0.6
CKS1B-206ENST00000474215 DKK3Q9UBP4 350 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 HS3ST3A1Q9Y663 406 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 CHD5Q8TDI0 1954 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 PCNX2A6NKB5 2137 aa11.33□□□□□ -0.6
CKS1B-206ENST00000474215 CEP295Q9C0D2 2601 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 SSU72P8A0A1W2PR75 194 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 INSIG1O15503 277 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 TNFSF14O43557 240 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 H2AFZP0C0S5 128 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 ATXN1LP0C7T5 689 aaKnown RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 TIMP2P16035 220 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 AMPD1P23109 780 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 EPHA8P29322 1005 aaPredicted RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 SSR1P43307 286 aaKnown RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 CSNK1DP48730 415 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 SUOXP51687 545 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 CLDN2P57739 230 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 SLC25A11Q02978 314 aaKnown RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 IL10RBQ08334 325 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 NSUN2Q08J23 767 aaKnown RBP eCLIP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 BNIP3Q12983 259 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 FGL2Q14314 439 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 RFTN1Q14699 578 aaPredicted RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 HADHQ16836 314 aaKnown RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 TMCO3Q6UWJ1 677 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 H2AFVQ71UI9 128 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 ABI3BPQ7Z7G0 1075 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 SRLQ86TD4 932 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 DCP2Q8IU60 420 aaKnown RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 OR13H1Q8NG92 308 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 ZNF564Q8TBZ8 553 aaPredicted RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 ASB12Q8WXK4 309 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 CTNNBL1Q8WYA6 563 aaPredicted RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 EXOC2Q96KP1 924 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 BMFQ96LC9 184 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 ZNF641Q96N77 438 aaPredicted RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 LENG8Q96PV6 779 aaPredicted RBP11.32□□□□□ -0.6
CKS1B-206ENST00000474215 CSPG4P5Q96PW8 444 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
CKS1B-206ENST00000474215 SP110Q9HB58 689 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms