RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 PRMT1Q99873 361 aaKnown RBP12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 TNKS2Q9H2K2 1166 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 LRIT1Q9P2V4 623 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 HESX1Q9UBX0 185 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 KCTD3Q9Y597 815 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 MED13LQ71F56 2210 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 CCDC168Q8NDH2 2452 aa12.9□□□□□ -0.34
PCYT1A-214ENST00000473978 B4GAT1O43505 415 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 SNAP91O60641 907 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 CPNE6O95741 557 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 APOEP02649 317 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 TCN2P20062 427 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 L1CAMP32004 1257 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 B4GALNT1Q00973 533 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 CENPCQ03188 943 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 ALG11Q2TAA5 492 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 PMF1Q6P1K2 205 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 PARS2Q7L3T8 475 aaKnown RBP12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 TIPARPQ7Z3E1 657 aaKnown RBP12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 VPS36Q86VN1 386 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 ZSCAN30Q86W11 494 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 SLC34A3Q8N130 599 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 TTC39CQ8N584 583 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 NUDT22Q9BRQ3 303 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 MBNL1Q9NR56 388 aaKnown RBP12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 ZNF106Q9H2Y7 1883 aaKnown RBP12.89□□□□□ -0.35
PCYT1A-214ENST00000473978 IGHV5-10-1A0A0J9YXX1 117 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 ENDOD1O94919 500 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 TRIM49P0CI25 452 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 TRIM49CP0CI26 452 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 SETSIPP0DME0 302 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CASP1P29466 404 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 ABL2P42684 1182 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 IRAK1P51617 712 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 VAMP7P51809 220 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 MC1RQ01726 317 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CEBPZQ03701 1054 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 ARHGEF7Q14155 803 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 AMZ1Q400G9 498 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 OGFOD3Q6PK18 319 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 UNC13DQ70J99 1090 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 RD3Q7Z3Z2 195 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 NLGN4XQ8N0W4 816 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 NLGN4YQ8NFZ3 816 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 TMEM174Q8WUU8 243 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CCDC74BQ96LY2 380 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 PSMB7Q99436 277 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 EFHD1Q9BUP0 239 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 ASPSCR1Q9BZE9 553 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 SPRY4Q9C004 299 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 TLK1Q9UKI8 766 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 MORC2Q9Y6X9 1032 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 KCNU1A8MYU2 1149 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 HNRNPRO43390 633 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 TSPAN6O43657 245 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 RASGRP1O95267 797 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 MAP4P27816 1152 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 COPB1P53618 953 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 OR1D5P58170 312 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 HLTFQ14527 1009 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 E2F4Q16254 413 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 C14orf28Q4W4Y0 310 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CRTC2Q53ET0 693 aaPredicted RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 SYPL2Q5VXT5 272 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CEP135Q66GS9 1140 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 FBXL22Q6P050 247 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 LINGO4Q6UY18 593 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 SLC35F5Q8WV83 523 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 EEF2KMTQ96G04 330 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 MIS12Q9H081 205 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 INTS2Q9H0H0 1204 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 CYP4F12Q9HCS2 524 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 OCIAD1Q9NX40 245 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 VPS51Q9UID3 782 aa12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 MRPS18BQ9Y676 258 aaKnown RBP12.88□□□□□ -0.35
PCYT1A-214ENST00000473978 DCHS2Q6V1P9 2916 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 ARHGAP10A1A4S6 786 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 O00370 1275 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 NEMP1O14524 444 aa12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 NUDT21O43809 227 aaKnown RBP12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 ZNF821O75541 412 aaPredicted RBP12.87□□□□□ -0.35
PCYT1A-214ENST00000473978 CD19P15391 556 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms