RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CPNE1Q99829 537 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 MAN1C1Q9NR34 630 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 ASAH2Q9NR71 780 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 VPS45Q9NRW7 570 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 CLEC4EQ9ULY5 219 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
VARS2-206ENST00000473916 H0Y626 953 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 CCL22O00626 93 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 DHRS4L1P0CG22 281 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 ARCN1P48444 511 aaKnown RBP18.21■□□□□ 0.51
VARS2-206ENST00000473916 PDE1CQ14123 709 aaPredicted RBP18.21■□□□□ 0.51
VARS2-206ENST00000473916 POTEHQ6S545 545 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 TIFABQ6ZNK6 161 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 DENND6AQ8IWF6 608 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 CACNA2D3Q8IZS8 1091 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 SHKBP1Q8TBC3 707 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 PHOSPHO2Q8TCD6 241 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 MGME1Q9BQP7 344 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 MECRQ9BV79 373 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 CAB39LQ9H9S4 337 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 ARNT2Q9HBZ2 717 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 NOD2Q9HC29 1040 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 TREX1Q9NSU2 369 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 TXNDC16Q9P2K2 825 aa18.21■□□□□ 0.51
VARS2-206ENST00000473916 MTO1Q9Y2Z2 717 aaKnown RBP18.21■□□□□ 0.51
VARS2-206ENST00000473916 PIRTP0C851 137 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 SERPINH1P50454 418 aaKnown RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 SLC7A9P82251 487 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 CYTH1Q15438 398 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 ZNF697Q5TEC3 545 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 FSTL4Q6MZW2 842 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 ZNF449Q6P9G9 518 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 ELMOD1Q8N336 334 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 DCLK2Q8N568 766 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 ZNF75CPQ92670 426 aaPredicted RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 TMA16Q96EY4 203 aaKnown RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 ZNF599Q96NL3 588 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 DDX50Q9BQ39 737 aaKnown RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 MCMBPQ9BTE3 642 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 CINPQ9BW66 212 aaPredicted RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 GGT7Q9UJ14 662 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 PLLPQ9Y342 182 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 KCTD3Q9Y597 815 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 TRAV19A0A0A6YYK7 116 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 LOC285095A0A1B0GVY8 99 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 PER2O15055 1255 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 SNX3O60493 162 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 LUC7L3O95232 432 aaKnown RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 CNTFP26441 200 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 GABRB3P28472 473 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 NTHL1P78549 312 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 MPP1Q00013 466 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 PDE1BQ01064 536 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 IFT88Q13099 833 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 CTBP1Q13363 440 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 DLG2Q15700 870 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 SLC5A9Q2M3M2 681 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 C16orf46Q6P387 395 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 TPGS1Q6ZTW0 290 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 SPNS2Q8IVW8 549 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 HJURPQ8NCD3 748 aaPredicted RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 ARMC2Q8NEN0 867 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 LRRC8CQ8TDW0 803 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 SMIM14Q96QK8 99 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 PRKAG3Q9UGI9 489 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 SEPT3Q9UH03 358 aa18.2■□□□□ 0.5
VARS2-206ENST00000473916 PRRC2BQ5JSZ5 2229 aaKnown RBP18.2■□□□□ 0.5
VARS2-206ENST00000473916 LEFTY2O00292 366 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 MOSPD3O75425 235 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 LATS1O95835 1130 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 ALADP13716 330 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 CDC25CP30307 473 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 CSKP41240 450 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 SCNN1BP51168 640 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 LIMK2P53671 638 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 IRX4P78413 519 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 GRTP1Q5TC63 336 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 PDPK2PQ6A1A2 396 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 C6orf89Q6UWU4 347 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 CCDC117Q8IWD4 279 aaPredicted RBP18.19■□□□□ 0.5
VARS2-206ENST00000473916 FAM217AQ8IXS0 508 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 PSKH2Q96QS6 385 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 IQCGQ9H095 443 aaKnown RBP18.19■□□□□ 0.5
VARS2-206ENST00000473916 NSRP1Q9H0G5 558 aaKnown RBP18.19■□□□□ 0.5
VARS2-206ENST00000473916 RETREG1Q9H6L5 497 aa18.19■□□□□ 0.5
VARS2-206ENST00000473916 DNMT3BQ9UBC3 853 aaKnown RBP18.19■□□□□ 0.5
VARS2-206ENST00000473916 BUD23O43709 281 aaKnown RBP18.18■□□□□ 0.5
VARS2-206ENST00000473916 ZMPSTE24O75844 475 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 CA3P07451 260 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 SERPINB4P48594 390 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 PTPRCAPQ14761 206 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 TEAD2Q15562 447 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 GPR158Q5T848 1215 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 ALG1LQ6GMV1 187 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 TDRD5Q8NAT2 981 aaKnown RBP18.18■□□□□ 0.5
VARS2-206ENST00000473916 OR13J1Q8NGT2 312 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 DDI1Q8WTU0 396 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 FEM1AQ9BSK4 669 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 SNX15Q9NRS6 342 aa18.18■□□□□ 0.5
VARS2-206ENST00000473916 ZNF358Q9NW07 568 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms