RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 NFS1Q9Y697 457 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 MAD1L1Q9Y6D9 718 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 TEX264Q9Y6I9 313 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 SPTBN5Q9NRC6 3674 aaKnown RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 SMAD6O43541 496 aaKnown RBP10.88□□□□□ -0.67
SP140-208ENST00000473711 CPP00450 1065 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 CISD3P0C7P0 127 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 SP100P23497 879 aaPredicted RBP10.88□□□□□ -0.67
SP140-208ENST00000473711 SSTR1P30872 391 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 ADRA1AP35348 466 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 SLC6A11P48066 632 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 NPY2RP49146 381 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 GPX6P59796 221 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 RHOAP61586 193 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 CRADDP78560 199 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 SLC20A2Q08357 652 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 IFFO1Q0D2I5 559 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 PDGFRLQ15198 375 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 FUT11Q495W5 492 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 INO80DQ53TQ3 878 aaPredicted RBP10.88□□□□□ -0.67
SP140-208ENST00000473711 CEP85LQ5SZL2 805 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 CERCAMQ5T4B2 595 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 NAPEPLDQ6IQ20 393 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 CASC4Q6P4E1 433 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 C3orf62Q6ZUJ4 267 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 SLC25A41Q8N5S1 370 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 ZNF557Q8N988 423 aaPredicted RBP10.88□□□□□ -0.67
SP140-208ENST00000473711 ATP11CQ8NB49 1132 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 SMRP1Q8NCR6 262 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 ATP2A3Q93084 1043 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 ELSPBP1Q96BH3 223 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 RPL10LQ96L21 214 aaKnown RBP10.88□□□□□ -0.67
SP140-208ENST00000473711 NSMCE3Q96MG7 304 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
SP140-208ENST00000473711 MGME1Q9BQP7 344 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 RPP25Q9BUL9 199 aaKnown RBP10.88□□□□□ -0.67
SP140-208ENST00000473711 SLC2A11Q9BYW1 496 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 ECT2Q9H8V3 914 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 NOD2Q9HC29 1040 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 HPS4Q9NQG7 708 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 SYBUQ9NX95 663 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 BFARQ9NZS9 450 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 LHX3Q9UBR4 397 aa10.88□□□□□ -0.67
SP140-208ENST00000473711 PRRC2BQ5JSZ5 2229 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 A0A087WUV0 522 aaPredicted RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 TLDC2A0PJX2 215 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 OTOL1A6NHN0 477 aaPredicted RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 INSIG1O15503 277 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 HOXC11O43248 304 aaPredicted RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 ATP9BO43861 1147 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 SERPINF2P08697 491 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 NUDT17P0C025 328 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 PSMC3P17980 439 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 POLR2EP19388 210 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 CR2P20023 1033 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 GDI1P31150 447 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 DGKGP49619 791 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 STK19P49842 368 aaPredicted RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 GEMIN4P57678 1058 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 ZNF844Q08AG5 666 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 FCHO2Q0JRZ9 810 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 CDH17Q12864 832 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 NR1H3Q13133 447 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 DMC1Q14565 340 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 SKIV2LQ15477 1246 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 GEN1Q17RS7 908 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 ATXN7L2Q5T6C5 722 aaPredicted RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 MBLAC2Q68D91 279 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 ALG1LQ6GMV1 187 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 DENND5AQ6IQ26 1287 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 RANBP10Q6VN20 620 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 KIAA0907Q7Z7F0 614 aaPredicted RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 SRLQ86TD4 932 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 ADIPOR2Q86V24 386 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 C12orf40Q86WS4 652 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 PPM1EQ8WY54 764 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 MYLIPQ8WY64 445 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 SUSD6Q92537 303 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 FGF14Q92915 247 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 TADA1Q96BN2 335 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 LRRC39Q96DD0 335 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 STAMBPL1Q96FJ0 436 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 NECTIN4Q96NY8 510 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 NUDCD1Q96RS6 583 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 TRIM56Q9BRZ2 755 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 FSD1LQ9BXM9 530 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 VPS45Q9NRW7 570 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 ZC3H7BQ9UGR2 993 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 SLC25A13Q9UJS0 675 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 FBXO10Q9UK96 956 aa10.87□□□□□ -0.67
SP140-208ENST00000473711 MYO18AQ92614 2054 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 NUP210Q8TEM1 1887 aaPredicted RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 LAMA2P24043 3122 aaKnown RBP10.87□□□□□ -0.67
SP140-208ENST00000473711 SMIM23A6NLE4 172 aa10.86□□□□□ -0.67
SP140-208ENST00000473711 AP3B1O00203 1094 aa10.86□□□□□ -0.67
SP140-208ENST00000473711 OPA1O60313 960 aa10.86□□□□□ -0.67
SP140-208ENST00000473711 RNF40O75150 1001 aa10.86□□□□□ -0.67
SP140-208ENST00000473711 TULP3O75386 442 aa10.86□□□□□ -0.67
SP140-208ENST00000473711 ECI2O75521 394 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms