RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 GTF3C2Q8WUA4 911 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 LPGAT1Q92604 370 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 UPF1Q92900 1129 aaKnown RBP eCLIP6.18□□□□□ -1.42
HERC4-209ENST00000473533 PGAP3Q96FM1 320 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 SNX27Q96L92 541 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TEKT5Q96M29 485 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 MCMBPQ9BTE3 642 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 C1QTNF1Q9BXJ1 281 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 MAGEB5Q9BZ81 275 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ADAMTS10Q9H324 1103 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CACNA2D2Q9NY47 1150 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ZDHHC2Q9UIJ5 367 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 PCDHGA7Q9Y5G6 932 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 LCTP09848 1927 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 A0A0G2JMZ2 1700 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 RRN3P2A6NIE6 340 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 H3BSA7 217 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ZSCAN9O15535 394 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 TSPAN1O60635 241 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 BAIAP3O94812 1187 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CHRNGP07510 517 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TXNP10599 105 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 ERCC2P18074 760 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 WARSP23381 471 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 ARRB2P32121 409 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 MS4A2Q01362 244 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 EPS8Q12929 822 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TUBA3CQ13748 450 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 SOWAHAQ2M3V2 549 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ZNF829Q3KNS6 432 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 AGKQ53H12 422 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 KIAA0930Q6ICG6 404 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 KLHDC8BQ8IXV7 354 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TMEM192Q8IY95 271 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 LILRA2Q8N149 483 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 AGR3Q8TD06 166 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 OSCP1Q8WVF1 389 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 C18orf25Q96B23 403 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 ATXN7L3BQ96GX2 97 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 C1orf50Q9BV19 199 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 MROH8Q9H579 483 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 POMKQ9H5K3 350 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CCM2LQ9NUG4 571 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 TBC1D13Q9NVG8 400 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ZNF358Q9NW07 568 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 FNIP2Q9P278 1114 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TMEM181Q9P2C4 612 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 HSFX1Q9UBD0 423 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 G3BP2Q9UN86 482 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 WDR37Q9Y2I8 494 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 C16orf96A6NNT2 1141 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TK2O00142 265 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 DLX3O60479 287 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 SORBS2O94875 1100 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 LTFP02788 710 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 LTA4HP09960 611 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 HSD17B1P14061 328 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 INSRRP14616 1297 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 NPR3P17342 541 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CCNCP24863 283 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 IRF9Q00978 393 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 PEX6Q13608 980 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 LRP8Q14114 963 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ACAP2Q15057 778 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 RAB6CQ53S08 254 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 PPM1LQ5SGD2 360 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 C9orf57Q5W0N0 161 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 PRR23BQ6ZRT6 265 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TRIM67Q6ZTA4 783 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 FRA10AC1Q70Z53 315 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 BNIPLQ7Z465 357 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 MICALL2Q8IY33 904 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 EFCAB3Q8N7B9 438 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 LINC01465Q8N7H1 131 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ZBTB8BQ8NAP8 495 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 KCTD4Q8WVF5 259 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ATP6V1E2Q96A05 226 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 KLRG1Q96E93 195 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CENPNQ96H22 339 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 ELMO2Q96JJ3 720 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 COX4I2Q96KJ9 171 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 KLHL32Q96NJ5 620 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 TBL1YQ9BQ87 522 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 RAB6CQ9H0N0 254 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CNGB3Q9NQW8 809 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 RHBDL2Q9NX52 303 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 ARHGEF38Q9NXL2 777 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 SLC17A6Q9P2U8 582 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 GNPTGQ9UJJ9 305 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 CNOT6Q9ULM6 557 aaKnown RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 MAGED2Q9UNF1 606 aaPredicted RBP6.18□□□□□ -1.42
HERC4-209ENST00000473533 CSADQ9Y600 493 aa6.18□□□□□ -1.42
HERC4-209ENST00000473533 PLXNA1Q9UIW2 1896 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 RNF103-CHMP3A0A140T963 221 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 TTC36A6NLP5 189 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 ANGPT2O15123 496 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 FGF10O15520 208 aaPredicted RBP6.17□□□□□ -1.42
HERC4-209ENST00000473533 DNAJB5O75953 348 aa6.17□□□□□ -1.42
HERC4-209ENST00000473533 IPO13O94829 963 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms