RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TCEA3O75764 348 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 ITGA2BP08514 1039 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 UGT1A5P35504 534 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 CLCN1P35523 988 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 ETV5P41161 510 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 SULT1E1P49888 294 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 CETN1Q12798 172 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 SGCGQ13326 291 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 ATXN7L2Q5T6C5 722 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-209ENST00000473421 TMPRSS9Q7Z410 1059 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 SLC47A2Q86VL8 602 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 VPS36Q86VN1 386 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 DRC7Q8IY82 874 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 ARL14Q8N4G2 192 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 KYQ8NBH2 561 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 SHC3Q92529 594 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 CCDC74AQ96AQ1 378 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 SRRTQ9BXP5 876 aaKnown RBP12.82□□□□□ -0.36
TRAF4-209ENST00000473421 EPB41L5Q9HCM4 733 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 SIX2Q9NPC8 291 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 HECAQ9UBI9 543 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-209ENST00000473421 GULP1Q9UBP9 304 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
TRAF4-209ENST00000473421 UNC13CQ8NB66 2214 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 LRRK1Q38SD2 2015 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 ILVBLA1L0T0 632 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 PLD2O14939 933 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 AREL1O15033 823 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 SMC2O95347 1197 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 UGT2B4P06133 528 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 ITIH1P19827 911 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 FLT3P36888 993 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 RECQLP46063 649 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-209ENST00000473421 MARSP56192 900 aaKnown RBP12.81□□□□□ -0.36
TRAF4-209ENST00000473421 GNA12Q03113 381 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 DEUP1Q05D60 604 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 SPIDRQ14159 915 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 FAXCQ5TGI0 409 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 RAB11FIP2Q7L804 512 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 ZFAND4Q86XD8 727 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 LURAP1LQ8IV03 231 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 SDR16C5Q8N3Y7 309 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 FBXO39Q8N4B4 442 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 PCDH20Q8N6Y1 951 aaKnown RBP12.81□□□□□ -0.36
TRAF4-209ENST00000473421 ZNF397Q8NF99 534 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-209ENST00000473421 PCDH19Q8TAB3 1148 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 FAM174AQ8TBP5 190 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 HTR3CQ8WXA8 447 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 TSACCQ96A04 125 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-209ENST00000473421 GRAMD1AQ96CP6 724 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 CCDC97Q96F63 343 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-209ENST00000473421 PPP1R16AQ96I34 528 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 C1orf74Q96LT6 269 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 ATP13A1Q9HD20 1204 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAF4-209ENST00000473421 SPASTQ9UBP0 616 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 COQ6Q9Y2Z9 468 aa12.81□□□□□ -0.36
TRAF4-209ENST00000473421 CHD5Q8TDI0 1954 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FLNCQ14315 2725 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FAM72CH0Y354 149 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FOXN3O00409 490 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-209ENST00000473421 KRIT1O00522 736 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 SUV39H1O43463 412 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 TSPAN6O43657 245 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 ANXA6P08133 673 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 EIF4A3P38919 411 aaKnown RBP12.8□□□□□ -0.36
TRAF4-209ENST00000473421 MORC3Q14149 939 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 CLCA4Q14CN2 919 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 ALG11Q2TAA5 492 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 ZNF805Q5CZA5 627 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 BRMS1LQ5PSV4 323 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FAM72AQ5TYM5 149 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FAM72DQ6L9T8 149 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 DPY19L2P1Q6NXN4 242 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 USP53Q70EK8 1073 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 BNIPLQ7Z465 357 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FAM72BQ86X60 149 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FAM131BQ86XD5 332 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 JAMLQ86YT9 394 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 RYBPQ8N488 228 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-209ENST00000473421 TP53I13Q8NBR0 393 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-209ENST00000473421 TPCN2Q8NHX9 752 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 SGF29Q96ES7 293 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 PGAP3Q96FM1 320 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-209ENST00000473421 LIN37Q96GY3 246 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-209ENST00000473421 KLHL32Q96NJ5 620 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FAM117AQ9C073 453 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 CEP44Q9C0F1 390 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 KLC2Q9H0B6 622 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 EVA1BQ9NVM1 165 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 FOXJ2Q9P0K8 574 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 PISDQ9UG56 409 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 LRP4O75096 1905 aa12.8□□□□□ -0.36
TRAF4-209ENST00000473421 PRAMEF33A0A0G2JMD5 474 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 D6RAR5 112 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 NEMP1O14524 444 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 PRAMEF10O60809 474 aa12.79□□□□□ -0.36
TRAF4-209ENST00000473421 RPLP0P05388 317 aaKnown RBP12.79□□□□□ -0.36
TRAF4-209ENST00000473421 TIMP2P16035 220 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms