RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 NXPE2Q96DL1 559 aa9.06□□□□□ -0.96
CHEK2-223ENST00000472807 IFT43Q96FT9 208 aa9.06□□□□□ -0.96
CHEK2-223ENST00000472807 VCPIP1Q96JH7 1222 aa9.06□□□□□ -0.96
CHEK2-223ENST00000472807 PARVAQ9NVD7 372 aa9.06□□□□□ -0.96
CHEK2-223ENST00000472807 RALYQ9UKM9 306 aaKnown RBP9.06□□□□□ -0.96
CHEK2-223ENST00000472807 FZD10Q9ULW2 581 aa9.06□□□□□ -0.96
CHEK2-223ENST00000472807 RAXQ9Y2V3 346 aa9.06□□□□□ -0.96
CHEK2-223ENST00000472807 HS3ST3A1Q9Y663 406 aa9.06□□□□□ -0.96
CHEK2-223ENST00000472807 TDRD6O60522 2096 aaKnown RBP9.06□□□□□ -0.96
CHEK2-223ENST00000472807 TRABD2BA6NFA1 517 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 NEMP2A6NFY4 417 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 IGLON5A6NGN9 336 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 LRRC53A6NM62 1247 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 TMCO5BA8MYB1 307 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 RASA4BC9J798 803 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 H3BM21 787 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 TRIM38O00635 465 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 FPGTO14772 594 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 RASA4O43374 803 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 SIGLEC6O43699 453 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 PIAS2O75928 621 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 PAK4O96013 591 aaPredicted RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 PSMA2P25787 234 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 ABL2P42684 1182 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 YBEYP58557 167 aaPredicted RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 HNRNPKP61978 463 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 DAB2P98082 770 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 CYP4F3Q08477 520 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 ZNF211Q13398 564 aaPredicted RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 MAMLD1Q13495 774 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 SERINC3Q13530 473 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 CAMK2BQ13554 666 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 ASIC2Q16515 512 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 PROX2Q3B8N5 592 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 INO80DQ53TQ3 878 aaPredicted RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 HES3Q5TGS1 186 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 GDPD4Q6W3E5 623 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 PARGQ86W56 976 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 DENND6BQ8NEG7 585 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 OR4C6Q8NH72 309 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 BAP1Q92560 729 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 HMCESQ96FZ2 354 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 KLHL32Q96NJ5 620 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 LENG8Q96PV6 779 aaPredicted RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 NCAPGQ9BPX3 1015 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 C1QTNF7Q9BXJ2 289 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 MAGEB5Q9BZ81 275 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 TTYH3Q9C0H2 523 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 NOL6Q9H6R4 1146 aaKnown RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 RTN4Q9NQC3 1192 aaKnown RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 EVA1BQ9NVM1 165 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 UCKL1Q9NWZ5 548 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 DNAJC28Q9NX36 388 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 TAS2R14Q9NYV8 317 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 NLGN3Q9NZ94 848 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 TMEM63CQ9P1W3 806 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 IPO11Q9UI26 975 aaKnown RBP9.05□□□□□ -0.96
CHEK2-223ENST00000472807 LHX6Q9UPM6 363 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 AP4E1Q9UPM8 1137 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 ITM2BQ9Y287 266 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 GPSM3Q9Y4H4 160 aa9.05□□□□□ -0.96
CHEK2-223ENST00000472807 SPTY2D1-AS1A0A0U1RR47 76 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 POM121BA6NF01 834 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 WASH4PA8MWX3 477 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 EIF3CLB5ME19 914 aaKnown RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 RAD51BO15315 384 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 TEX33O43247 280 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 NME1P15531 152 aaKnown RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 XPAP23025 273 aaPredicted RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 ACP1P24666 158 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 NDST2P52849 883 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 CLDN6P56747 220 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 TARDBPQ13148 414 aaKnown RBP eCLIP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 PDE1CQ14123 709 aaPredicted RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 FGL2Q14314 439 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 GRM3Q14832 879 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 CFAP58Q5T655 872 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 CAVIN1Q6NZI2 390 aaKnown RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 IRF2BP2Q7Z5L9 587 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 TTC7BQ86TV6 843 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 DNAAF5Q86Y56 855 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 UMODL1-AS1Q8N2C9 162 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 SLC25A45Q8N413 288 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 ZNF548Q8NEK5 533 aaPredicted RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 CXorf40AQ8TE69 158 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 ASB12Q8WXK4 309 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 EIF3CQ99613 913 aaKnown RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 SYT11Q9BT88 431 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 DUSP23Q9BVJ7 150 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 C1QTNF2Q9BXJ5 285 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 HAUS4Q9H6D7 363 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 UBA2Q9UBT2 640 aaPredicted RBP9.04□□□□□ -0.96
CHEK2-223ENST00000472807 GGT7Q9UJ14 662 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 SCINQ9Y6U3 715 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 BPTFQ12830 3046 aa9.04□□□□□ -0.96
CHEK2-223ENST00000472807 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
CHEK2-223ENST00000472807 ARHGAP42A6NI28 874 aa9.03□□□□□ -0.96
CHEK2-223ENST00000472807 EEF2KO00418 725 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms