RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 PAK4O96013 591 aaPredicted RBP19.71■□□□□ 0.75
COMMD1-208ENST00000472729 SMTNL2Q2TAL5 461 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 TMCO3Q6UWJ1 677 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 GLRX5Q86SX6 157 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 GATAD2AQ86YP4 633 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 CHCHD4Q8N4Q1 142 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 CXorf40AQ8TE69 158 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 NSMCE1Q8WV22 266 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 CINPQ9BW66 212 aaPredicted RBP19.71■□□□□ 0.75
COMMD1-208ENST00000472729 C1QTNF7Q9BXJ2 289 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 SLC39A8Q9C0K1 460 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 LRRC19Q9H756 370 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 LCMT1Q9UIC8 334 aa19.71■□□□□ 0.75
COMMD1-208ENST00000472729 A6NNZ2 444 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 J3KR12 359 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 FPGTO14772 594 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 AKR1B10O60218 316 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 PRAMEF11O60813 436 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 CYP1A2P05177 515 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 EIF4A3P38919 411 aaKnown RBP19.7■□□□□ 0.74
COMMD1-208ENST00000472729 ZFYVE27Q5T4F4 411 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 DCP2Q8IU60 420 aaKnown RBP19.7■□□□□ 0.74
COMMD1-208ENST00000472729 BBS5Q8N3I7 341 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 PNPLA1Q8N8W4 532 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 NETO2Q8NC67 525 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 EXOC2Q96KP1 924 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 KLC2Q9H0B6 622 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 FZD3Q9NPG1 666 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 CWC15Q9P013 229 aaKnown RBP19.7■□□□□ 0.74
COMMD1-208ENST00000472729 CA5BQ9Y2D0 317 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 BTBD3Q9Y2F9 522 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 MFHAS1Q9Y4C4 1052 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 NEUROG3Q9Y4Z2 214 aa19.7■□□□□ 0.74
COMMD1-208ENST00000472729 C10orf142B7Z368 130 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 RNF103O00237 685 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 H2AFZP0C0S5 128 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 EPHA8P29322 1005 aaPredicted RBP19.69■□□□□ 0.74
COMMD1-208ENST00000472729 SERPINB6P35237 376 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 RENBPP51606 427 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 SUOXP51687 545 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 RFTN1Q14699 578 aaPredicted RBP19.69■□□□□ 0.74
COMMD1-208ENST00000472729 CYTH1Q15438 398 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 DPYSL2Q16555 572 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 ERAP2Q6P179 960 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 H2AFVQ71UI9 128 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 PTAR1Q7Z6K3 402 aaPredicted RBP19.69■□□□□ 0.74
COMMD1-208ENST00000472729 TMEM145Q8NBT3 493 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 ZNF564Q8TBZ8 553 aaPredicted RBP19.69■□□□□ 0.74
COMMD1-208ENST00000472729 SAP25Q8TEE9 199 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 CCDC42Q96M95 316 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 CPEB1Q9BZB8 566 aaKnown RBP19.69■□□□□ 0.74
COMMD1-208ENST00000472729 ZFR2Q9UPR6 939 aaKnown RBP19.69■□□□□ 0.74
COMMD1-208ENST00000472729 HS3ST3A1Q9Y663 406 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 PCDH15Q96QU1 1955 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 PI4KAP42356 2102 aa19.69■□□□□ 0.74
COMMD1-208ENST00000472729 CEP192Q8TEP8 1941 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 IGLON5A6NGN9 336 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 LDOC1O95751 146 aaPredicted RBP19.68■□□□□ 0.74
COMMD1-208ENST00000472729 SERPINA4P29622 427 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 HNRNPH3P31942 346 aaKnown RBP19.68■□□□□ 0.74
COMMD1-208ENST00000472729 RXRGP48443 463 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 CLDN2P57739 230 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 ELP6Q0PNE2 266 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 NUMA1Q14980 2115 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 SLC18A3Q16572 532 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 ST3GAL2Q16842 350 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 TMEM259Q4ZIN3 620 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 UNQ6494/PRO21346Q6UXR6 183 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 Q6ZSR6 202 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 EID2Q8N6I1 236 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 NIPA2Q8N8Q9 360 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 HCAR2Q8TDS4 363 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 TEKT4Q8WW24 435 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 ADAMTS14Q8WXS8 1223 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 BTBD6Q96KE9 485 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 ZNF641Q96N77 438 aaPredicted RBP19.68■□□□□ 0.74
COMMD1-208ENST00000472729 TUBGCP5Q96RT8 1024 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 ATP13A3Q9H7F0 1226 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 UVRAGQ9P2Y5 699 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 DKK3Q9UBP4 350 aa19.68■□□□□ 0.74
COMMD1-208ENST00000472729 TOP3BO95985 862 aaKnown RBP19.67■□□□□ 0.74
COMMD1-208ENST00000472729 ATXN1LP0C7T5 689 aaKnown RBP19.67■□□□□ 0.74
COMMD1-208ENST00000472729 RARAP10276 462 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 RABIFP47224 123 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 CDH6P55285 790 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 BCL2L1Q07817 233 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 IL10RBQ08334 325 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 ZNF235Q14590 738 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 BRAT1Q6PJG6 821 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 SPATS2Q86XZ4 545 aaKnown RBP19.67■□□□□ 0.74
COMMD1-208ENST00000472729 VSTM4Q8IW00 320 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 MAP7D3Q8IWC1 876 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 KCTD6Q8NC69 237 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 OR13H1Q8NG92 308 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 CNDP2Q96KP4 475 aaKnown RBP19.67■□□□□ 0.74
COMMD1-208ENST00000472729 DNAJC7Q99615 494 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 SUV39H2Q9H5I1 410 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 KLHL11Q9NVR0 708 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 SEPT3Q9UH03 358 aa19.67■□□□□ 0.74
COMMD1-208ENST00000472729 MSRB2Q9Y3D2 182 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms