RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, human

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-214	ENST00000472398	FDPS	P14324	419 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	KRT4	P19013	534 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	EPOR	P19235	508 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CYP2B6	P20813	491 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	MCM7	P33993	719 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CTNNB1	P35222	781 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CDKN1A	P38936	164 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	GRIA4	P48058	902 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	AARS	P49588	968 aa	Known RBP eCLIP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	GSDMD	P57764	484 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ROR2	Q01974	943 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CEBPZ	Q03701	1054 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	TBL3	Q12788	808 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	SRSF5	Q13243	272 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ALX1	Q15699	326 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	PRICKLE4	Q2TBC4	344 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ELOA3B	Q3SY89	546 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	PDCD4	Q53EL6	469 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	HIKESHI	Q53FT3	197 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	FAM76B	Q5HYJ3	339 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	TOR2A	Q5JU69	321 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ADGRF1	Q5T601	910 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	DEPDC1	Q5TB30	811 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	AGBL2	Q5U5Z8	902 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	AFMID	Q63HM1	303 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	PTRHD1	Q6GMV3	140 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	JADE1	Q6IE81	842 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	SULT1C3	Q6IMI6	304 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	KLHL24	Q6TFL4	600 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	MOXD1	Q6UVY6	613 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	SCARA5	Q6ZMJ2	495 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	TRMT10C	Q7L0Y3	403 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CDKL3	Q8IVW4	592 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	NATD1	Q8N6N6	113 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ANKRD13C	Q8N6S4	541 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	MARCH10	Q8NA82	808 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	BHLHE23	Q8NDY6	225 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	SETD9	Q8NE22	299 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ELOA3	Q8NG57	546 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	OR8J2	Q8NGG1	315 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	BAHD1	Q8TBE0	780 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	DYDC1	Q8WWB3	177 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	BRF1	Q92994	677 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	DVL3	Q92997	716 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ISG20	Q96AZ6	181 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CHMP6	Q96FZ7	201 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	C1orf159	Q96HA4	380 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	APOPT1	Q96IL0	206 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	RPGRIP1	Q96KN7	1286 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	LINC00615	Q96LM1	132 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	GDF15	Q99988	308 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	REEP2	Q9BRK0	252 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	WDR18	Q9BV38	432 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	C1orf43	Q9BWL3	253 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	TEX12	Q9BXU0	123 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ACE2	Q9BYF1	805 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	PANK2	Q9BZ23	570 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	C17orf75	Q9HAS0	396 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF287	Q9HBT7	754 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	RXFP1	Q9HBX9	757 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	PRDM8	Q9NQV8	689 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF275	Q9NSD4	429 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	FAM120C	Q9NX05	1096 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	MRPL39	Q9NYK5	338 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	VPS54	Q9P1Q0	977 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CRNN	Q9UBG3	495 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ATP6V1H	Q9UI12	483 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ENPP5	Q9UJA9	477 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	AJAP1	Q9UKB5	411 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ZNF214	Q9UL59	606 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	MYO6	Q9UM54	1294 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CDC14A	Q9UNH5	594 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CHKB	Q9Y259	395 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	AP4B1	Q9Y6B7	739 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	PMF1-BGLAP	U3KQ54	211 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398		A0A087WZ62	844 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398		A0A088AWK7	358 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ERICH2	A1L162	156 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	TRIM49B	A6NDI0	452 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	FAM170B	A6NMN3	283 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	FCHO1	O14526	889 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	XPO1	O14980	1071 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	SLC16A6	O15403	523 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CRCP	O75575	148 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	AKAP3	O75969	853 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	SLCO2B1	O94956	709 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	BMP10	O95393	424 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	TGM6	O95932	706 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CHEK2	O96017	543 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	TK1	P04183	234 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CRYGC	P07315	174 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ITGA5	P08648	1049 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	IGFBP1	P08833	259 aa	Predicted RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CALM1	P0DP23	149 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CALM2	P0DP24	149 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	CALM3	P0DP25	149 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	BRAF	P15056	766 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	ACPP	P15309	386 aa		3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	POLR2E	P19388	210 aa	Known RBP	3.28	□□□□□ -1.88
TTC3-214	ENST00000472398	FUT1	P19526	365 aa		3.28	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms