RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 OR6K2Q8NGY2 324 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 KCNV2Q8TDN2 545 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 CSGALNACT1Q8TDX6 532 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 EDAQ92838 391 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 ARRDC3Q96B67 414 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 MSANTD3Q96H12 275 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 TDRD1Q9BXT4 1180 aaKnown RBP10.01□□□□□ -0.81
SF3A1-207ENST00000471342 TM6SF2Q9BZW4 377 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 CIPCQ9C0C6 399 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 MKRN2Q9H000 416 aaKnown RBP10.01□□□□□ -0.81
SF3A1-207ENST00000471342 CHRDQ9H2X0 955 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 SP110Q9HB58 689 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 CD93Q9NPY3 652 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 CASS4Q9NQ75 786 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 UBP1Q9NZI7 540 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 FAM153AQ9UHL3 310 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 EVLQ9UI08 416 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-207ENST00000471342 PCDHGC4Q9Y5F7 938 aa10.01□□□□□ -0.81
SF3A1-207ENST00000471342 KANSL1LA0AUZ9 987 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 TYW5A2RUC4 315 aaKnown RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 MTSS1O43312 755 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 RNF40O75150 1001 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 AVILO75366 819 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 HEXIM1O94992 359 aaKnown RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 IFNB1P01574 187 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 APODP05090 189 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 RHOXF2BP0C7M4 288 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 TIMP2P16035 220 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 TPSB2P20231 275 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 TNFRSF8P28908 595 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 CA5AP35218 305 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 TIE1P35590 1138 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 CD86P42081 329 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 WASP42768 502 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 VPS41P49754 854 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 CCNHP51946 323 aaPredicted RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 WNT3AP56704 352 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 TAS2R38P59533 333 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 MRPS21P82921 87 aaKnown RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 TPSAB1Q15661 275 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 QPCTQ16769 361 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 ODF2Q5BJF6 829 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 SYCP2LQ5T4T6 812 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 CCNI2Q6ZMN8 369 aaPredicted RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 CAMK1DQ8IU85 385 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 UBALD2Q8IYN6 164 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 SIX5Q8N196 739 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 STK40Q8N2I9 435 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 MPP5Q8N3R9 675 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 ATP11CQ8NB49 1132 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 MCUQ8NE86 351 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 MNS1Q8NEH6 495 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 MYRIPQ8NFW9 859 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 FBXO25Q8TCJ0 367 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 SIGLEC10Q96LC7 697 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 RUNDC3BQ96NL0 473 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 RHOXF2Q9BQY4 288 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 TRIM56Q9BRZ2 755 aaKnown RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 CPEB1Q9BZB8 566 aaKnown RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 SLC6A17Q9H1V8 727 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 RSPH9Q9H1X1 276 aaPredicted RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 EPB41L5Q9HCM4 733 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 EIF2B3Q9NR50 452 aaKnown RBP10□□□□□ -0.81
SF3A1-207ENST00000471342 RAB6BQ9NRW1 208 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 SEPT10Q9P0V9 454 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 WHRNQ9P202 907 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 PAK5Q9P286 719 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 EBF1Q9UH73 591 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 SPO11Q9Y5K1 396 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 BDP1A6H8Y1 2624 aa10□□□□□ -0.81
SF3A1-207ENST00000471342 MIA3Q5JRA6 1907 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 GOLGA6L10A0A0M3HER8 536 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 TARSL2A2RTX5 802 aaKnown RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 K7ESF4 209 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 AURKAO14965 403 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 USP12O75317 370 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 BANF1O75531 89 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 PGLSO95336 258 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 EPOP01588 193 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 PRKCGP05129 697 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 ATP5BP06576 529 aaKnown RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 ABL2P42684 1182 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 ITGA8P53708 1063 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 SEC13P55735 322 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 FASTKD3Q14CZ7 662 aaKnown RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 DNTTIP2Q5QJE6 756 aaKnown RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 WDR93Q6P2C0 686 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 MAMSTRQ6ZN01 415 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 AADATQ8N5Z0 425 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 ZNF513Q8N8E2 541 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 TXNDC5Q8NBS9 432 aaKnown RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 MDGA1Q8NFP4 955 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 ZNF778Q96MU6 729 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 MCCC1Q96RQ3 725 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 PARD6BQ9BYG5 372 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 OSBPL6Q9BZF3 934 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 POLR1EQ9GZS1 481 aaKnown RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 DPH5Q9H2P9 285 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 TBC1D17Q9HA65 648 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 LMAN1LQ9HAT1 526 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms