RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 UGT2B4P06133 528 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 C1SP09871 688 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 UBASH3AP57075 661 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 SGCGQ13326 291 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 MAPK8IP2Q13387 824 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-207ENST00000467985 ABI3BPQ7Z7G0 1075 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 EID2Q8N6I1 236 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 RNF214Q8ND24 703 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 ZCCHC14Q8WYQ9 949 aaKnown RBP19.36■□□□□ 0.69
COL7A1-207ENST00000467985 IFT43Q96FT9 208 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 CNDP2Q96KP4 475 aaKnown RBP19.36■□□□□ 0.69
COL7A1-207ENST00000467985 MYOCQ99972 504 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 ISCUQ9H1K1 167 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 DHX35Q9H5Z1 703 aaKnown RBP19.36■□□□□ 0.69
COL7A1-207ENST00000467985 LRRC19Q9H756 370 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 KLHL11Q9NVR0 708 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 CA5BQ9Y2D0 317 aa19.36■□□□□ 0.69
COL7A1-207ENST00000467985 ENC1O14682 589 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 DAPK3O43293 454 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 KRT37O76014 449 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 SKILP12757 684 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 GKP32189 559 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 SUOXP51687 545 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 BNIP3Q12983 259 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 GRM3Q14832 879 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 ACAP1Q15027 740 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 TDRD12Q587J7 1177 aaKnown RBP19.35■□□□□ 0.69
COL7A1-207ENST00000467985 ATXN7L2Q5T6C5 722 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-207ENST00000467985 GCNT7Q6ZNI0 430 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 ASB12Q8WXK4 309 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 KLHL32Q96NJ5 620 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 LENG8Q96PV6 779 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-207ENST00000467985 SNRNP25Q9BV90 132 aaKnown RBP19.35■□□□□ 0.69
COL7A1-207ENST00000467985 C1QTNF2Q9BXJ5 285 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 CALN1Q9BXU9 219 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 KLC2Q9H0B6 622 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 FZD3Q9NPG1 666 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 GPATCH2LQ9NWQ4 482 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 DKK3Q9UBP4 350 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 UBA2Q9UBT2 640 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-207ENST00000467985 PCSK1NQ9UHG2 260 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 PTPRBP23467 1997 aa19.35■□□□□ 0.69
COL7A1-207ENST00000467985 LAMA5O15230 3695 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 NBEAQ8NFP9 2946 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 ARHGAP42A6NI28 874 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 PAK4O96013 591 aaPredicted RBP19.34■□□□□ 0.69
COL7A1-207ENST00000467985 MIPP30301 263 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 PCK1P35558 622 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 PBX1P40424 430 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 HCAR3P49019 387 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 ZBED6P86452 979 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 SMAD1Q15797 465 aaKnown RBP19.34■□□□□ 0.69
COL7A1-207ENST00000467985 KYAT3Q6YP21 454 aaKnown RBP19.34■□□□□ 0.69
COL7A1-207ENST00000467985 RFX8Q6ZV50 586 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 KANSL1Q7Z3B3 1105 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 TTC7BQ86TV6 843 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 DNAAF5Q86Y56 855 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 ARFGAP1Q8N6T3 406 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 OR13H1Q8NG92 308 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 HCAR2Q8TDS4 363 aa19.34■□□□□ 0.69
COL7A1-207ENST00000467985 CPEB1Q9BZB8 566 aaKnown RBP19.34■□□□□ 0.69
COL7A1-207ENST00000467985 FPGTO14772 594 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 PRAMEF11O60813 436 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 LRCH4O75427 683 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 SERPING1P05155 500 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 ABL2P42684 1182 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 CLDN2P57739 230 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 HS1BP3Q53T59 392 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 CCDC157Q569K6 752 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 PPP6R3Q5H9R7 873 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-207ENST00000467985 HGSNATQ68CP4 663 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 Q6ZSR6 202 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 PTAR1Q7Z6K3 402 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-207ENST00000467985 DENND6BQ8NEG7 585 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 VOPP1Q96AW1 172 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 PEBP4Q96S96 227 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 KCTD15Q96SI1 283 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-207ENST00000467985 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.33■□□□□ 0.68
COL7A1-207ENST00000467985 TRIM7Q9C029 511 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 MYO1AQ9UBC5 1043 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 CAPN11Q9UMQ6 739 aa19.33■□□□□ 0.68
COL7A1-207ENST00000467985 IGLON5A6NGN9 336 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 AREL1O15033 823 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 RFPL3O75679 317 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 TPM3P06753 285 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 RABIFP47224 123 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 ZNF211Q13398 564 aaPredicted RBP19.32■□□□□ 0.68
COL7A1-207ENST00000467985 ILKQ13418 452 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 FGL2Q14314 439 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 CYTH1Q15438 398 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 CA9Q16790 459 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 TMPRSS12Q86WS5 348 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 TSC1Q92574 1164 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 BMFQ96LC9 184 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 C1QTNF7Q9BXJ2 289 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 ZWILCHQ9H900 591 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 PDFQ9HBH1 243 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 LHX3Q9UBR4 397 aa19.32■□□□□ 0.68
COL7A1-207ENST00000467985 LUC7L2Q9Y383 392 aaKnown RBP19.32■□□□□ 0.68
COL7A1-207ENST00000467985 SDC3O75056 442 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms