RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 B4GAT1O43505 415 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 NUDT21O43809 227 aaKnown RBP11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PRICKLE3O43900 615 aaPredicted RBP11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ZG16O60844 167 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ZBED1O96006 694 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PRNPP04156 253 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 CTSLP07711 333 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
VPS26A-204ENST00000467852 STAT5AP42229 794 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 LIMK2P53671 638 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 CDK18Q07002 472 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PSMD6Q15008 389 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ANKRD1Q15327 319 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 SNRNP35Q16560 246 aaKnown RBP11.87□□□□□ -0.51
VPS26A-204ENST00000467852 MS4A13Q5J8X5 152 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 OGFOD3Q6PK18 319 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ZNF438Q7Z4V0 828 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ESX1Q8N693 406 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 EDEM1Q92611 657 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ZNF516Q92618 1163 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PNPLA2Q96AD5 504 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 SNRNP40Q96DI7 357 aaKnown RBP11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 NUDT22Q9BRQ3 303 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 TWSG1Q9GZX9 223 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ASF1BQ9NVP2 202 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 RCOR3Q9P2K3 495 aaPredicted RBP11.87□□□□□ -0.51
VPS26A-204ENST00000467852 PCDHGB7Q9Y5F8 929 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 CSPG4Q6UVK1 2322 aa11.87□□□□□ -0.51
VPS26A-204ENST00000467852 ZGRF1Q86YA3 2104 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 IGLON5A6NGN9 336 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 TMEM200CA6NKL6 621 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 TOR1BO14657 336 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 STK17BO94768 372 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 RASGRP1O95267 797 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 PDGFRAP16234 1089 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 ALDH4A1P30038 563 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 SSTR2P30874 369 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 DLSTP36957 453 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 TKTL1P51854 596 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 NEK3P51956 506 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 ITGA1P56199 1179 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 OR1D5P58170 312 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 NUCB2P80303 420 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 ART3Q13508 389 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 RAB41Q5JT25 222 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 PAPD7Q5XG87 772 aaKnown RBP11.86□□□□□ -0.51
VPS26A-204ENST00000467852 PM20D1Q6GTS8 502 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 NADSYN1Q6IA69 706 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 TMEM135Q86UB9 458 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 HPS6Q86YV9 775 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 ASB12Q8WXK4 309 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 TSACCQ96A04 125 aaPredicted RBP11.86□□□□□ -0.51
VPS26A-204ENST00000467852 MYEOVQ96EZ4 313 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 AK8Q96MA6 479 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 RANBP9Q96S59 729 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 MDFIQ99750 246 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 NT5C1AQ9BXI3 368 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 C1QTNF2Q9BXJ5 285 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 TRIM55Q9BYV6 548 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 MLXIPLQ9NP71 852 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 CHST11Q9NPF2 352 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.86□□□□□ -0.51
VPS26A-204ENST00000467852 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
VPS26A-204ENST00000467852 TMEM184BQ9Y519 407 aaPredicted RBP11.86□□□□□ -0.51
VPS26A-204ENST00000467852 KLF2Q9Y5W3 355 aaPredicted RBP11.86□□□□□ -0.51
VPS26A-204ENST00000467852 PIPSLA2A3N6 862 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 ZSCAN5CA6NGD5 496 aaPredicted RBP11.85□□□□□ -0.51
VPS26A-204ENST00000467852 KATNA1O75449 491 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 F8A1P23610 371 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 CASP5P51878 434 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 PLK1P53350 603 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 SLC8A3P57103 927 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 CYP24A1Q07973 514 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 NCOA4Q13772 614 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 HLTFQ14527 1009 aaKnown RBP eCLIP11.85□□□□□ -0.51
VPS26A-204ENST00000467852 ME3Q16798 604 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 BSPRYQ5W0U4 402 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 SLC6A19Q695T7 634 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 MYO7BQ6PIF6 2116 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 PIGZQ86VD9 579 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 IQCKQ8N0W5 287 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 FAM46DQ8NEK8 389 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 OR4D9Q8NGE8 314 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 NDRG1Q92597 394 aaKnown RBP11.85□□□□□ -0.51
VPS26A-204ENST00000467852 ELMO3Q96BJ8 720 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 CTRCQ99895 268 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 NUCKS1Q9H1E3 243 aaKnown RBP11.85□□□□□ -0.51
VPS26A-204ENST00000467852 FADS3Q9Y5Q0 445 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
VPS26A-204ENST00000467852 FER1L5A0AVI2 2057 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 CHD5Q8TDI0 1954 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 ACANP16112 2415 aa11.85□□□□□ -0.51
VPS26A-204ENST00000467852 MN1Q10571 1320 aaPredicted RBP11.85□□□□□ -0.51
VPS26A-204ENST00000467852 MDC1Q14676 2089 aaKnown RBP11.84□□□□□ -0.51
VPS26A-204ENST00000467852 RHPN2P1A8MT19 583 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms