RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ATG16L1Q676U5 607 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 CWF19L1Q69YN2 538 aaKnown RBP10.18□□□□□ -0.78
PMF1-204ENST00000466489 FSTL4Q6MZW2 842 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 BBS12Q6ZW61 710 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 ASRGL1Q7L266 308 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 SRRM1Q8IYB3 904 aaKnown RBP10.18□□□□□ -0.78
PMF1-204ENST00000466489 CFAP52Q8N1V2 620 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 CCDC185Q8N715 623 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 FIBINQ8TAL6 211 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 SREK1Q8WXA9 508 aaKnown RBP10.18□□□□□ -0.78
PMF1-204ENST00000466489 CHFRQ96EP1 664 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
PMF1-204ENST00000466489 NAT9Q9BTE0 207 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 CCDC28BQ9BUN5 200 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 ADAM33Q9BZ11 813 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 DHX35Q9H5Z1 703 aaKnown RBP10.18□□□□□ -0.78
PMF1-204ENST00000466489 DCLRE1BQ9H816 532 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 ZWILCHQ9H900 591 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 STOML1Q9UBI4 398 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 PPARGC1AQ9UBK2 798 aaKnown RBP10.18□□□□□ -0.78
PMF1-204ENST00000466489 PCSK1NQ9UHG2 260 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 PLA2G4CQ9UP65 541 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 SLC8A2Q9UPR5 921 aa10.18□□□□□ -0.78
PMF1-204ENST00000466489 KMT2EQ8IZD2 1858 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SMIM23A6NLE4 172 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 H3BRJ5 948 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 AP3B1O00203 1094 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 EEF2KO00418 725 aaKnown RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 GFRA2O00451 464 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 MCF2LO15068 1137 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CREB3O43889 395 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 EGFP01133 1207 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 MT-ND3P03897 115 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ASLP04424 464 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 DCNP07585 359 aaKnown RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 RHOCP08134 193 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CHRNB1P11230 501 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 PABPC1P11940 636 aaKnown RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 RHOQP17081 205 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 POLR2EP19388 210 aaKnown RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 EPHB2P29323 1055 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 OR1E1P30953 314 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 GCKP35557 465 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 NNMTP40261 264 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SLCO1A2P46721 670 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 KCNJ1P48048 391 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SLC6A11P48066 632 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SERPINB9P50453 376 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CCR3P51677 355 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CLCN2P51788 898 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ST8SIA6P61647 398 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 IRX4P78413 519 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CDK16Q00536 496 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SULT2A1Q06520 285 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ZNF252P-AS1Q0IIN9 211 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 GPS1Q13098 491 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SNX1Q13596 522 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 KRT81Q14533 505 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 KRT72Q14CN4 511 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 TAZQ16635 292 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 GAB4Q2WGN9 574 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 C5orf22Q49AR2 442 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 PPP6R3Q5H9R7 873 aaPredicted RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 EOGTQ5NDL2 527 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 IER5LQ5T953 404 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ANKRD20A3Q5VUR7 823 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 FAM91A1Q658Y4 838 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ZNF449Q6P9G9 518 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ZNF783Q6ZMS7 281 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SPOCD1Q6ZMY3 1216 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 TBC1D1Q86TI0 1168 aaPredicted RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 SETD3Q86TU7 594 aaPredicted RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 C12orf40Q86WS4 652 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ZNF513Q8N8E2 541 aaPredicted RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 PPFIBP2Q8ND30 876 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 TEKT4Q8WW24 435 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CLDN23Q96B33 292 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 BTBD6Q96KE9 485 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CIPCQ9C0C6 399 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 MUC3BQ9H195 1237 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 CHRDQ9H2X0 955 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 VCXQ9H320 206 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 VCX3BQ9H321 246 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 STN1Q9H668 368 aaKnown RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 ACSS3Q9H6R3 686 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 ETNK1Q9HBU6 452 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SAYSD1Q9NPB0 183 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.17□□□□□ -0.78
PMF1-204ENST00000466489 ABCB8Q9NUT2 735 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.17□□□□□ -0.78
PMF1-204ENST00000466489 SPATA6Q9NWH7 488 aaPredicted RBP10.17□□□□□ -0.78
PMF1-204ENST00000466489 ZNF180Q9UJW8 692 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 FBXO10Q9UK96 956 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 FZD10Q9ULW2 581 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 PHTF1Q9UMS5 762 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 C15orf41Q9Y2V0 281 aa10.17□□□□□ -0.78
PMF1-204ENST00000466489 IGLV3-10A0A075B6K4 115 aa10.16□□□□□ -0.78
PMF1-204ENST00000466489 A0A0A0MRY4 1105 aa10.16□□□□□ -0.78
PMF1-204ENST00000466489 DRGXA6NNA5 263 aa10.16□□□□□ -0.78
PMF1-204ENST00000466489 SGK1O00141 431 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms