RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 FCRL2Q96LA5 508 aaPredicted RBP9.65□□□□□ -0.86
ATG3-203ENST00000465980 PRICKLE1Q96MT3 831 aaPredicted RBP9.65□□□□□ -0.86
ATG3-203ENST00000465980 SERPINB11Q96P15 392 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 NPY6RQ99463 290 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 CARD6Q9BX69 1037 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 MIR1-1HGQ9H1L0 117 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 MTG2Q9H4K7 406 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 NEUROD4Q9HD90 331 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 DDX56Q9NY93 547 aaKnown RBP9.65□□□□□ -0.86
ATG3-203ENST00000465980 COX16Q9P0S2 106 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 USP36Q9P275 1121 aaKnown RBP9.65□□□□□ -0.86
ATG3-203ENST00000465980 STOML2Q9UJZ1 356 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 TTC7AQ9ULT0 858 aaPredicted RBP9.65□□□□□ -0.86
ATG3-203ENST00000465980 STAP1Q9ULZ2 295 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 SLC6A14Q9UN76 642 aa9.65□□□□□ -0.86
ATG3-203ENST00000465980 TDRD6O60522 2096 aaKnown RBP9.65□□□□□ -0.87
ATG3-203ENST00000465980 KNTC1P50748 2209 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 PDE2AO00408 941 aaPredicted RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 CAPN9O14815 690 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 NPC1O15118 1278 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 CEP104O60308 925 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 TRUB2O95900 331 aaKnown RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 SERPINF2P08697 491 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 PYGMP11217 842 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 SPINK2P20155 84 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 PMLP29590 882 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 HOXD12P35452 270 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 DPP6P42658 865 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 SSR1P43307 286 aaKnown RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 SULT1E1P49888 294 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 TPMTP51580 245 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 COPAP53621 1224 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 HDAC4P56524 1084 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 PITX1P78337 314 aaPredicted RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 ATP11AP98196 1134 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 RING1Q06587 406 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 CDO1Q16878 200 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 DCAF6Q58WW2 860 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 NKAPLQ5M9Q1 402 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 SYCP2LQ5T4T6 812 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 SEL1L2Q5TEA6 688 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 CCDC181Q5TID7 509 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 OTUD1Q5VV17 481 aaPredicted RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 PEAR1Q5VY43 1037 aaPredicted RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 MBLAC2Q68D91 279 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 LRRC69Q6ZNQ3 347 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 ADIPOR2Q86V24 386 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 MFN1Q8IWA4 741 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 AHI1Q8N157 1196 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 CARNMT1Q8N4J0 409 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 ZCCHC9Q8N567 271 aaKnown RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 MINDY1Q8N5J2 469 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 HJURPQ8NCD3 748 aaPredicted RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 MNS1Q8NEH6 495 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 EXD1Q8NHP7 514 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 CEP76Q8TAP6 659 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 PGAP3Q96FM1 320 aaPredicted RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 MS4A14Q96JA4 679 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 TBCBQ99426 244 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 ALG2Q9H553 416 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 CAPN10Q9HC96 672 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 XPO7Q9UIA9 1087 aaKnown RBP9.64□□□□□ -0.87
ATG3-203ENST00000465980 PLA2G4CQ9UP65 541 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 CACNA1GO43497 2377 aa9.64□□□□□ -0.87
ATG3-203ENST00000465980 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 PTPRBP23467 1997 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 SPAARA0A1B0GVQ0 90 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 TYW5A2RUC4 315 aaKnown RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 CTAGE15A4D2H0 777 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 M0QYT0 321 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 PGRMC1O00264 195 aaKnown RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 IRAK2O43187 625 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 TIMM44O43615 452 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 PRPSAP2O60256 369 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 OPHN1O60890 802 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 ZRANB2O95218 330 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATG3-203ENST00000465980 TOP3BO95985 862 aaKnown RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 F9P00740 461 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 APOEP02649 317 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 CTAGE8P0CG41 777 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 RARAP10276 462 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 POLR2EP19388 210 aaKnown RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 TFE3P19532 575 aaPredicted RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 IL1R2P27930 398 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 GJC1P36383 396 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 CSKP41240 450 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 ZNF211Q13398 564 aaPredicted RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 CDH18Q13634 790 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 E2F5Q15329 346 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 ATP13A4Q4VNC1 1196 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 RAB6CQ53S08 254 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 BOLA3Q53S33 107 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 ZC3H12AQ5D1E8 599 aaKnown RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 WDR45BQ5MNZ6 344 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 RAP1GAP2Q684P5 730 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 TXNRD3NBQ6F5E7 133 aa9.63□□□□□ -0.87
ATG3-203ENST00000465980 CYP4V2Q6ZWL3 525 aaPredicted RBP9.63□□□□□ -0.87
ATG3-203ENST00000465980 RABEPKQ7Z6M1 372 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms