RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 MFHAS1Q9Y4C4 1052 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 COL5A1P20908 1838 aaPredicted RBP22.09■■□□□ 1.13
LIME1-203ENST00000465591 EIF3CLB5ME19 914 aaKnown RBP22.09■■□□□ 1.13
LIME1-203ENST00000465591 RAD51BO15315 384 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 AP1G1O43747 822 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 TRIM16O95361 564 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 PAPOLAP51003 745 aaKnown RBP22.09■■□□□ 1.13
LIME1-203ENST00000465591 NDST2P52849 883 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 SMTNL2Q2TAL5 461 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 LRRC73Q5JTD7 316 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 AFMIDQ63HM1 303 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 UNQ6494/PRO21346Q6UXR6 183 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 KANSL1Q7Z3B3 1105 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 TP53INP2Q8IXH6 220 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 CASKIN2Q8WXE0 1202 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 EIF3CQ99613 913 aaKnown RBP22.09■■□□□ 1.13
LIME1-203ENST00000465591 CDC6Q99741 560 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 ERVMER34-1Q9H9K5 563 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 NEUROG3Q9Y4Z2 214 aa22.09■■□□□ 1.13
LIME1-203ENST00000465591 ASPMQ8IZT6 3477 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 GOLGA8CPA6NN73 597 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 PRAMEF11O60813 436 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 DKK1O94907 266 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 ITIH2P19823 946 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 HNRNPA2B1P22626 353 aaKnown RBP22.08■■□□□ 1.13
LIME1-203ENST00000465591 PCK1P35558 622 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 RXRGP48443 463 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 OVGP1Q12889 678 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 MAPK8IP2Q13387 824 aaPredicted RBP22.08■■□□□ 1.13
LIME1-203ENST00000465591 DPYSQ14117 519 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 GDPD4Q6W3E5 623 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 KDM7AQ6ZMT4 941 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 ARHGAP36Q6ZRI8 547 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 PSTKQ8IV42 348 aaKnown RBP22.08■■□□□ 1.13
LIME1-203ENST00000465591 OR13H1Q8NG92 308 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 IQCDQ96DY2 449 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 KLHDC7BQ96G42 594 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 SLC17A9Q9BYT1 436 aa22.08■■□□□ 1.13
LIME1-203ENST00000465591 UBA2Q9UBT2 640 aaPredicted RBP22.08■■□□□ 1.13
LIME1-203ENST00000465591 APOBEC2Q9Y235 224 aaKnown RBP22.08■■□□□ 1.13
LIME1-203ENST00000465591 IGSF6O95976 241 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 PAK4O96013 591 aaPredicted RBP22.07■■□□□ 1.12
LIME1-203ENST00000465591 CYP1A2P05177 515 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 ITGAVP06756 1048 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 THEGLP0DJG4 465 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 AKT2P31751 481 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 RGRP47804 291 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 RPS21P63220 83 aaKnown RBP22.07■■□□□ 1.12
LIME1-203ENST00000465591 NFKBIBQ15653 356 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 ST3GAL2Q16842 350 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 KIAA1161Q6NSJ0 714 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 ALKBH5Q6P6C2 394 aaKnown RBP22.07■■□□□ 1.12
LIME1-203ENST00000465591 VPS36Q86VN1 386 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 CPNE8Q86YQ8 564 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 SLC22A18ASQ8N1D0 253 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 BMFQ96LC9 184 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 NUP85Q9BW27 656 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 OSBPL1AQ9BXW6 950 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 MSRB2Q9Y3D2 182 aa22.07■■□□□ 1.12
LIME1-203ENST00000465591 KNTC1P50748 2209 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 FAM221BA6H8Z2 402 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 IGLON5A6NGN9 336 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 AREL1O15033 823 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 DAPK3O43293 454 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 TNFSF14O43557 240 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 SDC3O75056 442 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 PIGNO95427 931 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 HNRNPH3P31942 346 aaKnown RBP22.06■■□□□ 1.12
LIME1-203ENST00000465591 ARRB1P49407 418 aaPredicted RBP22.06■■□□□ 1.12
LIME1-203ENST00000465591 DPYSL2Q16555 572 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 CCDC122Q5T0U0 273 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 ABI3BPQ7Z7G0 1075 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 FEM1CQ96JP0 617 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 KLF6Q99612 283 aaPredicted RBP22.06■■□□□ 1.12
LIME1-203ENST00000465591 C1QTNF2Q9BXJ5 285 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 ZWILCHQ9H900 591 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 ETNK2Q9NVF9 386 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 ANAPC7Q9UJX3 599 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 SHROOM3Q8TF72 1996 aa22.06■■□□□ 1.12
LIME1-203ENST00000465591 POM121BA6NF01 834 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 ARHGAP42A6NI28 874 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 MAGEC1O60732 1142 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 PROS1P07225 676 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 RARAP10276 462 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 TIMP2P16035 220 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 EIF4A3P38919 411 aaKnown RBP22.05■■□□□ 1.12
LIME1-203ENST00000465591 HCAR3P49019 387 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 SLC25A11Q02978 314 aaKnown RBP22.05■■□□□ 1.12
LIME1-203ENST00000465591 PIGHQ14442 188 aaPredicted RBP22.05■■□□□ 1.12
LIME1-203ENST00000465591 ACAP1Q15027 740 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 OXR1Q8N573 874 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 EID2Q8N6I1 236 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 NIPA2Q8N8Q9 360 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 RNF214Q8ND24 703 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 HSPH1Q92598 858 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 RAB7BQ96AH8 199 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 TSPY26PQ9H489 355 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 DONSONQ9NYP3 566 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 FTSJ1Q9UET6 329 aa22.05■■□□□ 1.12
LIME1-203ENST00000465591 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.05■■□□□ 1.127e-11■■■■■ 38.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms