RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	NKX2-8	O15522	239 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LARGE1	O95461	756 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CLTB	P09497	229 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3H	P0C7X1	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DUSP1	P28562	367 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ADD2	P35612	726 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	AARS	P49588	968 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ARL4C	P56559	192 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PPFIA1	Q13136	1202 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	BIRC3	Q13489	604 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CBFB	Q13951	182 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KCNB1	Q14721	858 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ZKSCAN8	Q15776	578 aa	Predicted RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CNGA3	Q16281	694 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SUPT20HL1	Q3ZLR7	823 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GALNTL6	Q49A17	601 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LRRC24	Q50LG9	513 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ANKRD45	Q5TZF3	282 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3G	Q6DHY5	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3C	Q6IPX1	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RANBP10	Q6VN20	620 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SYNE3	Q6ZMZ3	975 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FAM9B	Q8IZU0	186 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GALNT4	Q8N4A0	578 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DCLK2	Q8N568	766 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	OR6Y1	Q8NGX8	325 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CLEC4C	Q8WTT0	213 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SNRNP27	Q8WVK2	155 aa	Known RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	AKAP1	Q92667	903 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GOLGA1	Q92805	767 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FAR2	Q96K12	515 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TSPAN18	Q96SJ8	248 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PARK7	Q99497	189 aa	Known RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ISCA1	Q9BUE6	129 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	NYX	Q9GZU5	481 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CDCP1	Q9H5V8	836 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CHODL	Q9H9P2	273 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	B3GNT3	Q9Y2A9	372 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DNHD1	Q96M86	4753 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	COL12A1	Q99715	3063 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ZNF804B	A4D1E1	1349 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GXYLT2	A0PJZ3	443 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SLC38A8	A6NNN8	435 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278		H3BNC9	293 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	BBOX1	O75936	387 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FAM155B	O75949	473 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CYP21A2	P08686	494 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RXRA	P19793	462 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GRK5	P34947	590 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TERF1	P54274	439 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ELL	P55199	621 aa	Predicted RBP	5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ARHGAP8	P85298	464 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PDCL	Q13371	301 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KRTAP15-1	Q3LI76	137 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TTC22	Q5TAA0	569 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SUMO4	Q6EEV6	95 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TMEM105	Q8N8V8	129 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CPT1B	Q92523	772 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ZG16B	Q96DA0	208 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TRMT61A	Q96FX7	289 aa	Known RBP	5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RITA1	Q96K30	269 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FYTTD1	Q96QD9	318 aa	Known RBP	5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PLEKHF1	Q96S99	279 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	NFU1	Q9UMS0	254 aa		5.48	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TTC34	A8MYJ7	566 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TISP43	B9A030	160 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PRRT4	C9JH25	899 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278		H7C1Q1	480 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PRY	O14603	147 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	IRAK2	O43187	625 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CREB3	O43889	395 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LETM1	O95202	739 aa	Predicted RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SLC3A2	P08195	630 aa	Known RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	MYOG	P15173	224 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SERPINA4	P29622	427 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	STAT6	P42226	847 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RBM5	P52756	815 aa	Known RBP eCLIP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FOXL2	P58012	376 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SLC39A6	Q13433	755 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KPNB1	Q14974	876 aa	Known RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LARS2	Q15031	903 aa	Known RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PFKFB3	Q16875	520 aa	Predicted RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CCDC96	Q2M329	555 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PROSER3	Q2NL68	480 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FCRLB	Q6BAA4	426 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	WDR93	Q6P2C0	686 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PSRC1	Q6PGN9	363 aa	Predicted RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	VSTM1	Q6UX27	236 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GLMP	Q8WWB7	406 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ZBED3	Q96IU2	234 aa	Predicted RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GPR78	Q96P69	363 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TSPYL1	Q9H0U9	437 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ABHD16B	Q9H3Z7	469 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RMI1	Q9H9A7	625 aa		5.47	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ASNSD1	Q9NWL6	643 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms