RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	HLA-E	P13747	358 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	TPSB2	P20231	275 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	CES1	P23141	567 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	MCM3	P25205	808 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	TIE1	P35590	1138 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	KIR2DL1	P43626	348 aa	Predicted RBP	13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	RECQL	P46063	649 aa	Predicted RBP	13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	CSNK1D	P48730	415 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	CAV1	Q03135	178 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	MPP3	Q13368	585 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	SPARCL1	Q14515	664 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	TPSAB1	Q15661	275 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	CARD16	Q5EG05	197 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	KCTD11	Q693B1	232 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	NCEH1	Q6PIU2	408 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	KDELC2	Q7Z4H8	507 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	SRL	Q86TD4	932 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	HOOK3	Q86VS8	718 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	GSPT2	Q8IYD1	628 aa	Known RBP	13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	IPMK	Q8NFU5	416 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	OR2A12	Q8NGT7	310 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	PRCC	Q92733	491 aa	Predicted RBP	13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	PTPRN2	Q92932	1015 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	TADA1	Q96BN2	335 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	NSMCE3	Q96MG7	304 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	ACOX2	Q99424	681 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	FSD1L	Q9BXM9	530 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	NEUROG2	Q9H2A3	272 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	TMEM245	Q9H330	911 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	ZDHHC18	Q9NUE0	388 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	HECA	Q9UBI9	543 aa	Predicted RBP	13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	FBXL21	Q9UKT6	434 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	SHOC2	Q9UQ13	582 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	ATG2B	Q96BY7	2078 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	UQCRHL	A0A096LP55	91 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	MAN2B1	O00754	1011 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	PSMD3	O43242	534 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	UQCRH	P07919	91 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	MYBL2	P10244	700 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	PRKCH	P24723	683 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	TNFRSF8	P28908	595 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	ECHS1	P30084	290 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	IL12RB1	P42701	662 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	CCNH	P51946	323 aa	Predicted RBP	13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	AP1S1	P61966	158 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	OLIG2	Q13516	323 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	E2F5	Q15329	346 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	RALGPS1	Q5JS13	557 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	KDELC1	Q6UW63	502 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	DPY19L3	Q6ZPD9	716 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	KLHDC8B	Q8IXV7	354 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	CHPF	Q8IZ52	775 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	GJD3	Q8N144	294 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	MRGPRX2	Q96LB1	330 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	LRRC40	Q9H9A6	602 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	ARHGEF3	Q9NR81	526 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	VPS45	Q9NRW7	570 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	CACNA2D2	Q9NY47	1150 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	WNT16	Q9UBV4	365 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	RAB21	Q9UL25	225 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	NDRG2	Q9UN36	371 aa	Known RBP	13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	PCDHGC4	Q9Y5F7	938 aa		13.55	□□□□□ -0.24
ATF3-208	ENST00000465155	SMAP	O00193	183 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	USP12	O75317	370 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	PIGN	O95427	931 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	TUBB	P07437	444 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	GK	P32189	559 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	WAS	P42768	502 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	MAPK8	P45983	427 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	WNT3A	P56704	352 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	CDK16	Q00536	496 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	PRKCQ	Q04759	706 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	MYLK3	Q32MK0	819 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	C2orf27A	Q580R0	203 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	NAPEPLD	Q6IQ20	393 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	ZNF852	Q6ZMS4	543 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	PLPP6	Q8IY26	295 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	CHST14	Q8NCH0	376 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	PWWP2A	Q96N64	755 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	APOL2	Q9BQE5	337 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	FICD	Q9BVA6	458 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	FAM129A	Q9BZQ8	928 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	ZDHHC6	Q9H6R6	413 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	CD320	Q9NPF0	282 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	STON1	Q9Y6Q2	735 aa		13.54	□□□□□ -0.24
ATF3-208	ENST00000465155	EDDM13	A0A1B0GTR0	161 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	KRBA1	A5PL33	1030 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	NPC1	O15118	1278 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SUN1	O94901	812 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	POP4	O95707	220 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	AGT	P01019	485 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	EPHX1	P07099	455 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	GRIA1	P42261	906 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	SARNP	P82979	210 aa	Known RBP	13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	RAD51	Q06609	339 aa		13.53	□□□□□ -0.24
ATF3-208	ENST00000465155	BCL2L1	Q07817	233 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms