RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CDT1Q9H211 546 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 ANKRD10Q9NXR5 420 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 IL1RAPL1Q9NZN1 696 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 WNT16Q9UBV4 365 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 MYO6Q9UM54 1294 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 INSL5Q9Y5Q6 135 aa6.24□□□□□ -1.41
PTCD3-205ENST00000464541 PABPN1LA6NDY0 278 aaKnown RBP6.23□□□□□ -1.41
PTCD3-205ENST00000464541 CBY3A6NI87 242 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 INAFM1C9JVW0 142 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 CHL1O00533 1208 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 SMAD6O43541 496 aaKnown RBP6.23□□□□□ -1.41
PTCD3-205ENST00000464541 CREB3O43889 395 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 PYGLP06737 847 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 PCNAP12004 261 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 ARL1P40616 181 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-205ENST00000464541 LIFRP42702 1097 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 CDH15P55291 814 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 ADORA2A-AS1P86434 159 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 CYP4A11Q02928 519 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 TRAF2Q12933 501 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 GPR68Q15743 365 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 ZNF284Q2VY69 593 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 FBXL14Q8N1E6 418 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 OIT3Q8WWZ8 545 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 HVCN1Q96D96 273 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 NPFFR1Q9GZQ6 430 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 SLC32A1Q9H598 525 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 ADGRF5Q8IZF2 1346 aa6.23□□□□□ -1.41
PTCD3-205ENST00000464541 A0A1B0GVC2 190 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 HNRNPA1P09651 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTCD3-205ENST00000464541 NAGAP17050 411 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 RYKP34925 604 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 CDKN2AP42771 156 aaKnown RBP6.22□□□□□ -1.41
PTCD3-205ENST00000464541 RFX5P48382 616 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-205ENST00000464541 NUDT6P53370 316 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 LPIN1Q14693 890 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 C8orf82Q6P1X6 216 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-205ENST00000464541 TRILQ7L0X0 811 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 FAM160B2Q86V87 743 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 IQCF1Q8N6M8 205 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 MSTO1Q9BUK6 570 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 PEMTQ9UBM1 199 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTCD3-205ENST00000464541 PTGDR2Q9Y5Y4 395 aa6.22□□□□□ -1.41
PTCD3-205ENST00000464541 TSPAN4O14817 238 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 SLC25A17O43808 307 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 URODP06132 367 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 THPOP40225 353 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 NANOS2P60321 138 aaKnown RBP6.21□□□□□ -1.42
PTCD3-205ENST00000464541 RPP30P78346 268 aaKnown RBP6.21□□□□□ -1.42
PTCD3-205ENST00000464541 EFNB1P98172 346 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 SLC22A25Q6T423 547 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 RRM2BQ7LG56 351 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 TADA2BQ86TJ2 420 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 ESX1Q8N693 406 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 TSPYL6Q8N831 410 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 IL17REQ8NFR9 667 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 MIB2Q96AX9 1013 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 PHF21BQ96EK2 531 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 APOPT1Q96IL0 206 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 BABAM1Q9NWV8 329 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 KIAA1456Q9P272 454 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 SLC45A1Q9Y2W3 748 aa6.21□□□□□ -1.42
PTCD3-205ENST00000464541 A0A1B0GVT2 93 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 PROB1E7EW31 1015 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 ITM2AO43736 263 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 GLUD1P00367 558 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 SLC2A4P14672 509 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 GLUD2P49448 558 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 ABATP80404 500 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 CRYZQ08257 329 aaKnown RBP6.2□□□□□ -1.42
PTCD3-205ENST00000464541 SHBQ15464 509 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 SLC4A8Q2Y0W8 1093 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 ALFQ53S48 1182 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 TDRD12Q587J7 1177 aaKnown RBP6.2□□□□□ -1.42
PTCD3-205ENST00000464541 ZNF667Q5HYK9 610 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 TMEM81Q6P7N7 255 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 TBC1D26Q86UD7 250 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 SFTPA2Q8IWL1 248 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 ELP5Q8TE02 316 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 ZBTB10Q96DT7 871 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 YME1L1Q96TA2 773 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 SELENONQ9NZV5 590 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 NDRG3Q9UGV2 375 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 CRYL1Q9Y2S2 319 aa6.2□□□□□ -1.42
PTCD3-205ENST00000464541 IGHV4-28A0A0C4DH34 117 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 TYW5A2RUC4 315 aaKnown RBP6.19□□□□□ -1.42
PTCD3-205ENST00000464541 CLEC18AA5D8T8 446 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 TNPO2O14787 897 aaKnown RBP6.19□□□□□ -1.42
PTCD3-205ENST00000464541 T-ENOLP0DO92 83 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 COX7A2P14406 83 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 FMO4P31512 558 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 AMTP48728 403 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 PMS2P54278 862 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 NR1H2P55055 460 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 GALNT2Q10471 571 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 HNF4GQ14541 408 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 PRICKLE4Q2TBC4 344 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms