RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 OSBPL1AQ9BXW6 950 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 TTYH3Q9C0H2 523 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 PARVAQ9NVD7 372 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 GGT7Q9UJ14 662 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 ITM2BQ9Y287 266 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 PKD1L2Q7Z442 2459 aa19.13■□□□□ 0.65
SF3A1-205ENST00000463818 PTPRBP23467 1997 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 LRRC53A6NM62 1247 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 FFAR2O15552 330 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 ACP1P24666 158 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 HNF1BP35680 557 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 RHOAP61586 193 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 TARDBPQ13148 414 aaKnown RBP eCLIP19.12■□□□□ 0.65
SF3A1-205ENST00000463818 PARP15Q460N3 678 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 HS1BP3Q53T59 392 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 HES3Q5TGS1 186 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 PLEKHA7Q6IQ23 1121 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 KYAT3Q6YP21 454 aaKnown RBP19.12■□□□□ 0.65
SF3A1-205ENST00000463818 DNAAF5Q86Y56 855 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 OR4C6Q8NH72 309 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 ASB12Q8WXK4 309 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 NAP1L5Q96NT1 182 aaPredicted RBP19.12■□□□□ 0.65
SF3A1-205ENST00000463818 HAUS4Q9H6D7 363 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 GPATCH2LQ9NWQ4 482 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 DNAJC28Q9NX36 388 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 IPO11Q9UI26 975 aaKnown RBP19.12■□□□□ 0.65
SF3A1-205ENST00000463818 GPSM3Q9Y4H4 160 aa19.12■□□□□ 0.65
SF3A1-205ENST00000463818 ARID1BQ8NFD5 2236 aaPredicted RBP19.11■□□□□ 0.65
SF3A1-205ENST00000463818 FPGTO14772 594 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 AREL1O15033 823 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 SPINT1O43278 529 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 IGSF6O95976 241 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 GIMD1P0DJR0 217 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 TIMP2P16035 220 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 PSMA2P25787 234 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 RABIFP47224 123 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 FZD2Q14332 565 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 CYTH1Q15438 398 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 ASIC2Q16515 512 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 ZNF571Q7Z3V5 609 aaPredicted RBP19.11■□□□□ 0.65
SF3A1-205ENST00000463818 ARHGEF26Q96DR7 871 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 GPR27Q9NS67 375 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 AIPL1Q9NZN9 384 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 MFHAS1Q9Y4C4 1052 aa19.11■□□□□ 0.65
SF3A1-205ENST00000463818 COL5A1P20908 1838 aaPredicted RBP19.11■□□□□ 0.65
SF3A1-205ENST00000463818 FAM208BQ5VWN6 2430 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 SPTY2D1-AS1A0A0U1RR47 76 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 INSIG1O15503 277 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 FGF10O15520 208 aaPredicted RBP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 ATMINO43313 823 aaPredicted RBP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 MMP20O60882 483 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 FTLP02792 175 aaPredicted RBP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 ITIH2P19823 946 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 HTR7P34969 479 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 ZNF165P49910 485 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 TPI1P60174 286 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 HNRNPKP61978 463 aaKnown RBP eCLIP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 DAB2P98082 770 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 CA9Q16790 459 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 LRRC73Q5JTD7 316 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 CAVIN1Q6NZI2 390 aaKnown RBP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 ARFGAP1Q8N6T3 406 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 HNRNPLLQ8WVV9 542 aaKnown RBP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 DHX35Q9H5Z1 703 aaKnown RBP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 DONSONQ9NYP3 566 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 DKK3Q9UBP4 350 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 UBA2Q9UBT2 640 aaPredicted RBP19.1■□□□□ 0.65
SF3A1-205ENST00000463818 PCSK1NQ9UHG2 260 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 AP4E1Q9UPM8 1137 aa19.1■□□□□ 0.65
SF3A1-205ENST00000463818 APC2O95996 2303 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 A0A1W2PQC6 194 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 NEMP2A6NFY4 417 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 TMEM191CA6NGB0 347 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 J3KR12 359 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 EEF2KO00418 725 aaKnown RBP19.09■□□□□ 0.65
SF3A1-205ENST00000463818 SCAMP1O15126 338 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 CSF2P04141 144 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 ALPPL2P10696 532 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 GZMAP12544 262 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 E2F1Q01094 437 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 PDE1CQ14123 709 aaPredicted RBP19.09■□□□□ 0.65
SF3A1-205ENST00000463818 ERMARDQ5T6L9 678 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 KDM7AQ6ZMT4 941 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 CENPTQ96BT3 561 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 CELF6Q96J87 481 aaKnown RBP19.09■□□□□ 0.65
SF3A1-205ENST00000463818 CPEB1Q9BZB8 566 aaKnown RBP19.09■□□□□ 0.65
SF3A1-205ENST00000463818 LRRC19Q9H756 370 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 LHX3Q9UBR4 397 aa19.09■□□□□ 0.65
SF3A1-205ENST00000463818 ANKRD11Q6UB99 2663 aaPredicted RBP19.09■□□□□ 0.65
SF3A1-205ENST00000463818 TRPM6Q9BX84 2022 aa19.08■□□□□ 0.65
SF3A1-205ENST00000463818 ACACAQ13085 2346 aa19.08■□□□□ 0.65
SF3A1-205ENST00000463818 WDFY3Q8IZQ1 3526 aa19.08■□□□□ 0.65
SF3A1-205ENST00000463818 A0A1B0GTH6 734 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 DDX3XO00571 662 aaKnown RBP eCLIP19.08■□□□□ 0.644e-8■■■■□ 21.7
SF3A1-205ENST00000463818 NEBLO76041 1014 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 SKILP12757 684 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 MYF5P13349 255 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 PRKCIP41743 596 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 NDST2P52849 883 aa19.08■□□□□ 0.64
SF3A1-205ENST00000463818 PFN3P60673 137 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms