RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 DKK3Q9UBP4 350 aa20.85■□□□□ 0.93
PDLIM4-205ENST00000463615 ZFYVE26Q68DK2 2539 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 TRABD2BA6NFA1 517 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 TMEM191CA6NGB0 347 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 KRIT1O00522 736 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 CREB3O43889 395 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 PAK4O96013 591 aaPredicted RBP20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 GKP32189 559 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 CLDN2P57739 230 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 RAD51Q06609 339 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 IQCB1Q15051 598 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 GDPD4Q6W3E5 623 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 Q6ZSR6 202 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 RYBPQ8N488 228 aaPredicted RBP20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 OR6K2Q8NGY2 324 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 OR4C6Q8NH72 309 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 HMCESQ96FZ2 354 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 KLC2Q9H0B6 622 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 HAUS4Q9H6D7 363 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 LRRC19Q9H756 370 aa20.84■□□□□ 0.93
PDLIM4-205ENST00000463615 SPTY2D1-AS1A0A0U1RR47 76 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 POM121BA6NF01 834 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 TRIM38O00635 465 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 RAD51BO15315 384 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 PIAS2O75928 621 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 IGSF6O95976 241 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 UGT2B4P06133 528 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 GIMD1P0DJR0 217 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 RABIFP47224 123 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 SUOXP51687 545 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 NDST2P52849 883 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 NR1I3Q14994 352 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 ASIC2Q16515 512 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 ATXN7L2Q5T6C5 722 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 E4F1Q66K89 784 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 ZNF571Q7Z3V5 609 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 PSTKQ8IV42 348 aaKnown RBP20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 ARFGAP1Q8N6T3 406 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 MDM1Q8TC05 714 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 KLHL32Q96NJ5 620 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 NAP1L5Q96NT1 182 aaPredicted RBP20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 CALN1Q9BXU9 219 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 PDFQ9HBH1 243 aa20.83■□□□□ 0.93
PDLIM4-205ENST00000463615 IGLON5A6NGN9 336 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 SIGLEC6O43699 453 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 SDC3O75056 442 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 PSMA2P25787 234 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 HNF1BP35680 557 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 ZNF135P52742 658 aaPredicted RBP20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 TPI1P60174 286 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 PFN3P60673 137 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 RHOAP61586 193 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 SGCGQ13326 291 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 FZD2Q14332 565 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 CAVIN1Q6NZI2 390 aaKnown RBP20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 LEKR1Q6ZMV7 388 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 NCAPGQ9BPX3 1015 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 LHX3Q9UBR4 397 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 AP4E1Q9UPM8 1137 aa20.82■□□□□ 0.92
PDLIM4-205ENST00000463615 TSPAN11A1L157 253 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 FAM149AA5PLN7 773 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 DDX3XO00571 662 aaKnown RBP eCLIP20.81■□□□□ 0.926e-12■■■■□ 19.8
PDLIM4-205ENST00000463615 FPGTO14772 594 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 FTLP02792 175 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 CSF2P04141 144 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 NME1P15531 152 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 HNRNPKP61978 463 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 GRM3Q14832 879 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 CYTH1Q15438 398 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 CCDC157Q569K6 752 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 ERMARDQ5T6L9 678 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 AFMIDQ63HM1 303 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 PTAR1Q7Z6K3 402 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 MARCH9Q86YJ5 346 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 FAM181AQ8N9Y4 354 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 CENPTQ96BT3 561 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 UCKL1Q9NWZ5 548 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 NLGN3Q9NZ94 848 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 GPSM3Q9Y4H4 160 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 CSNK1G3Q9Y6M4 447 aa20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 DSPP15924 2871 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-205ENST00000463615 NEMP2A6NFY4 417 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 TMCO5BA8MYB1 307 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 NEMP1O14524 444 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 TOR1BO14657 336 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 RIOK3O14730 519 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 SCAMP1O15126 338 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 PRAMEF11O60813 436 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 MYBL1P10243 752 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 JUPP14923 745 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 CSNK1DP48730 415 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 HCAR3P49019 387 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 E2F1Q01094 437 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 CYP4V2Q6ZWL3 525 aaPredicted RBP20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 TTC7BQ86TV6 843 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 PARGQ86W56 976 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 ZNF354CQ86Y25 554 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 DNAAF5Q86Y56 855 aa20.8■□□□□ 0.92
PDLIM4-205ENST00000463615 TRIM11Q96F44 468 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms