RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 UBE2Q2Q8WVN8 375 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 NDRG1Q92597 394 aaKnown RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 CENPIQ92674 756 aaPredicted RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 FAM149B1Q96BN6 582 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 CCDC97Q96F63 343 aaPredicted RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 NPY6RQ99463 290 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 PACSIN1Q9BY11 444 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 METTL5Q9NRN9 209 aaKnown RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 KCND1Q9NSA2 647 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.39□□□□□ -0.59
SSR3-202ENST00000463503 NLGN3Q9NZ94 848 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 SFMBT1Q9UHJ3 866 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 ATXN7L1Q9ULK2 861 aaPredicted RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 STAP1Q9ULZ2 295 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 ERVW-1Q9UQF0 538 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 DMTF1Q9Y222 760 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 ABCA12Q86UK0 2595 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 CHD5Q8TDI0 1954 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3DA0A087WVF3 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3IA0A087WXS9 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3EA0A087X179 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3KA0A087X1G2 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 GOLGA6L7A0A1B0GV03 622 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3FA6NER0 549 aaPredicted RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3LB9A6J9 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 CASC3O15234 703 aaKnown RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 MAGEC1O60732 1142 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 CCDC175P0C221 793 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3HP0C7X1 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 VAV1P15498 845 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 RBMS1P29558 406 aaKnown RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 RFC1P35251 1148 aaPredicted RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 NUDT1P36639 197 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 FLT3P36888 993 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 ARHGAP25P42331 645 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 ZNF143P52747 638 aaPredicted RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 ST8SIA6P61647 398 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TLE1Q04724 770 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 SRSF6Q13247 344 aaKnown RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 MTA1Q13330 715 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 ELAVL3Q14576 367 aaKnown RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 TAF5Q15542 800 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 SLC25A52Q3SY17 297 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 FSCBQ5H9T9 825 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 PITRM1Q5JRX3 1037 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 AGBL4Q5VU57 503 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3GQ6DHY5 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 NADSYN1Q6IA69 706 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3CQ6IPX1 549 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TRNP1Q6NT89 227 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 STRADAQ7RTN6 431 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 TBC1D3Q8IZP1 549 aaPredicted RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 DEFB106AQ8N104 65 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 SLC22A18ASQ8N1D0 253 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 ACRBPQ8NEB7 543 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 JOSD2Q8TAC2 188 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 FIBINQ8TAL6 211 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 IFI44Q8TCB0 444 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 MAPK15Q8TD08 544 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 RNF139Q8WU17 664 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 PTPRN2Q92932 1015 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 EXTL1Q92935 676 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 ARHGEF26Q96DR7 871 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 SERPINB11Q96P15 392 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 CCNL2Q96S94 520 aaPredicted RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 CNPY3Q9BT09 278 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
SSR3-202ENST00000463503 TSGA10Q9BZW7 698 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 OSBPL2Q9H1P3 480 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 KDM4CQ9H3R0 1056 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 IGSF5Q9NSI5 407 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 KLHL11Q9NVR0 708 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 SLCO3A1Q9UIG8 710 aa11.38□□□□□ -0.59
SSR3-202ENST00000463503 UNC13CQ8NB66 2214 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 PRAMEF26H0Y7S4 382 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 GOLGA8SH3BPF8 625 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 IRAK2O43187 625 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 SLC7A4O43246 635 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 F9P00740 461 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 IL1BP01584 269 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 ITGB2P05107 769 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 SRPRAP08240 638 aaKnown RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 FAM87AP0C7U9 286 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 GPD1P21695 349 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 MAN1A1P33908 653 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 RPL7AP62424 266 aaKnown RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 KIF5AQ12840 1032 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 UBAP2LQ14157 1087 aaKnown RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 PIGHQ14442 188 aaPredicted RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 DCAF6Q58WW2 860 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 SYPL2Q5VXT5 272 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 DCUN1D2Q6PH85 259 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 PRPF39Q86UA1 669 aaKnown RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 DNAAF5Q86Y56 855 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 RNF10Q8N5U6 811 aaKnown RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 ZNF557Q8N988 423 aaPredicted RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
SSR3-202ENST00000463503 SLC35G2Q8TBE7 412 aa11.37□□□□□ -0.59
SSR3-202ENST00000463503 ZNF564Q8TBZ8 553 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms