RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 C1orf54Q8WWF1 131 aa20.51■□□□□ 0.87
NUP43-205ENST00000463048 MS4A14Q96JA4 679 aa20.51■□□□□ 0.87
NUP43-205ENST00000463048 PHOX2BQ99453 314 aa20.51■□□□□ 0.87
NUP43-205ENST00000463048 SEMA3CQ99985 751 aa20.51■□□□□ 0.87
NUP43-205ENST00000463048 BRD8Q9H0E9 1235 aa20.51■□□□□ 0.87
NUP43-205ENST00000463048 IRF2BPLQ9H1B7 796 aa20.51■□□□□ 0.87
NUP43-205ENST00000463048 NOD2Q9HC29 1040 aa20.51■□□□□ 0.87
NUP43-205ENST00000463048 FGGP02679 453 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 RBP3P10745 1247 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 IFI35P80217 286 aaPredicted RBP20.5■□□□□ 0.87
NUP43-205ENST00000463048 SNX1Q13596 522 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 LONRF2Q1L5Z9 754 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 SLC45A4Q5BKX6 768 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 CFAP58Q5T655 872 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 PARS2Q7L3T8 475 aaKnown RBP20.5■□□□□ 0.87
NUP43-205ENST00000463048 PDCD6IPQ8WUM4 868 aaKnown RBP20.5■□□□□ 0.87
NUP43-205ENST00000463048 UBE2Q2Q8WVN8 375 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 VOPP1Q96AW1 172 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 PPP1R16AQ96I34 528 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 MGME1Q9BQP7 344 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 BTBD1Q9H0C5 482 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 WSB2Q9NYS7 404 aaPredicted RBP20.5■□□□□ 0.87
NUP43-205ENST00000463048 SMARCAL1Q9NZC9 954 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 SCML1Q9UN30 329 aa20.5■□□□□ 0.87
NUP43-205ENST00000463048 C16orf96A6NNT2 1141 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 PTPN3P26045 913 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 OXTRP30559 389 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 CNR2P34972 360 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 HSPA9P38646 679 aaKnown RBP20.49■□□□□ 0.87
NUP43-205ENST00000463048 DHPSP49366 369 aaPredicted RBP20.49■□□□□ 0.87
NUP43-205ENST00000463048 BCL2L1Q07817 233 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 NSUN2Q08J23 767 aaKnown RBP eCLIP20.49■□□□□ 0.87
NUP43-205ENST00000463048 SFSWAPQ12872 951 aaKnown RBP20.49■□□□□ 0.87
NUP43-205ENST00000463048 ZNF805Q5CZA5 627 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 FBXL19Q6PCT2 694 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 NCEH1Q6PIU2 408 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 CDKL3Q8IVW4 592 aaPredicted RBP20.49■□□□□ 0.87
NUP43-205ENST00000463048 CNTD1Q8N815 330 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 TTC13Q8NBP0 860 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 COG1Q8WTW3 980 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 HTR3CQ8WXA8 447 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 NUDCD1Q96RS6 583 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 OSBPL9Q96SU4 736 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 IL12RB2Q99665 862 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 POLR1EQ9GZS1 481 aaKnown RBP20.49■□□□□ 0.87
NUP43-205ENST00000463048 ATP13A3Q9H7F0 1226 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 PCDHGC4Q9Y5F7 938 aa20.49■□□□□ 0.87
NUP43-205ENST00000463048 MUC6Q6W4X9 2439 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 HACD1B0YJ81 288 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 ZNF185O15231 689 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 KCNN4O15554 427 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 SEMA4FO95754 770 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 PRKCGP05129 697 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 ITIH2P19823 946 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 ITGB7P26010 798 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 SERPINA4P29622 427 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 CSNK1DP48730 415 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 AP1S1P61966 158 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 NHLH1Q02575 133 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 NIPAL4Q0D2K0 466 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 WASHC5Q12768 1159 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 XRCC4Q13426 336 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 PLK5Q496M5 336 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 PIP5KL1Q5T9C9 394 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 AGBL4Q5VU57 503 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 USP30Q70CQ3 517 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 ERN2Q76MJ5 926 aaKnown RBP20.48■□□□□ 0.87
NUP43-205ENST00000463048 SNX19Q92543 992 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 FATE1Q969F0 183 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 OSBPL1AQ9BXW6 950 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 CPEB1Q9BZB8 566 aaKnown RBP20.48■□□□□ 0.87
NUP43-205ENST00000463048 DUSP15Q9H1R2 295 aaPredicted RBP20.48■□□□□ 0.87
NUP43-205ENST00000463048 SUV39H2Q9H5I1 410 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 C6orf106Q9H6K1 298 aaPredicted RBP20.48■□□□□ 0.87
NUP43-205ENST00000463048 KLHL8Q9P2G9 620 aaPredicted RBP20.48■□□□□ 0.87
NUP43-205ENST00000463048 DNPEPQ9ULA0 475 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 ATP8A1Q9Y2Q0 1164 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 ANKRD36A6QL64 1941 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 FANCMQ8IYD8 2048 aa20.48■□□□□ 0.87
NUP43-205ENST00000463048 NUMA1Q14980 2115 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3DA0A087WVF3 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3IA0A087WXS9 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3EA0A087X179 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3KA0A087X1G2 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3FA6NER0 549 aaPredicted RBP20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3LB9A6J9 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3HP0C7X1 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 CR2P20023 1033 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 CD86P42081 329 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 NEK3P51956 506 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 SEMG2Q02383 582 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 ZNF33AQ06730 810 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 ELF2Q15723 593 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TEX44Q53QW1 395 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3GQ6DHY5 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3CQ6IPX1 549 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 SLC36A4Q6YBV0 504 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 LPCAT2Q7L5N7 544 aa20.47■□□□□ 0.87
NUP43-205ENST00000463048 TBC1D3Q8IZP1 549 aaPredicted RBP20.47■□□□□ 0.87
NUP43-205ENST00000463048 LRIG1Q96JA1 1093 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms