RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 SCML1Q9UN30 329 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 PLXNA1Q9UIW2 1896 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 OPHN1O60890 802 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 RASGRP1O95267 797 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 SRPRAP08240 638 aaKnown RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 JAM2P57087 298 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 ATP13A4Q4VNC1 1196 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 MPP7Q5T2T1 576 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 MRNIPQ6NTE8 343 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 FUT8Q9BYC5 575 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 CLPBQ9H078 707 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 DPEP2Q9H4A9 486 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 RC3H2Q9HBD1 1191 aaKnown RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 VPS51Q9UID3 782 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 ZNF236Q9UL36 1845 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 HIST1H2AGP0C0S8 130 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 UNGP13051 313 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 CHRNB2P17787 502 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 KRT15P19012 456 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 HIST1H2ADP20671 130 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 EIF2DP41214 584 aaKnown RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 ABL2P42684 1182 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 RFTN1Q14699 578 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 SMAD1Q15797 465 aaKnown RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 CST6Q15828 149 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 PAQR9Q6ZVX9 377 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 FRA10AC1Q70Z53 315 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 SLC13A5Q86YT5 568 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-215ENST00000462256 NETO2Q8NC67 525 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 CALML6Q8TD86 181 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 CXorf40BQ96DE9 158 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 HIST1H2AHQ96KK5 128 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 HSPA12BQ96MM6 686 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 HIST1H2AJQ99878 128 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 FEM1AQ9BSK4 669 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 H2AFJQ9BTM1 129 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 SMYD2Q9NRG4 433 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 USP3Q9Y6I4 520 aa9.38□□□□□ -0.91
DDX39B-215ENST00000462256 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TARSL2A2RTX5 802 aaKnown RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 EIF4E1BA6NMX2 242 aaKnown RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 MZF1P28698 734 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CLCN5P51795 746 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CSE1LP55060 971 aaKnown RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CDK18Q07002 472 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 ZNF234Q14588 700 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TTLL9Q3SXZ7 439 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TRIM74Q86UV6 250 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TRIM73Q86UV7 250 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TMEFF1Q8IYR6 380 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TBC1D19Q8N5T2 526 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 AP2M1Q96CW1 435 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TFR2Q9UP52 801 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CHKBQ9Y259 395 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 PCDHGC4Q9Y5F7 938 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 KIAA1217Q5T5P2 1943 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 APOC4-APOC2K7ER74 178 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CNTN5O94779 1100 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 SLC25A14O95258 325 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 APOC2P02655 101 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CHRM3P20309 590 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 AVPR2P30518 371 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 HADHAP40939 763 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 RGS4P49798 205 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 ZBTB16Q05516 673 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CAMK1Q14012 370 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 C1orf210Q8IVY1 113 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CAMKK1Q8N5S9 505 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 DTWD2Q8NBA8 298 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 AZIN2Q96A70 460 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CARD6Q9BX69 1037 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 GREB1LQ9C091 1923 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 LRRC40Q9H9A6 602 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 ARFGAP3Q9NP61 516 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TMPRSS4Q9NRS4 437 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TRIM10Q9UDY6 481 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 DNAJC16Q9Y2G8 782 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 RAI2Q9Y5P3 530 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 EME2A4GXA9 379 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 SH3BP5O60239 455 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 PCCBP05166 539 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 C5AR1P21730 350 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 STK19P49842 368 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 IRX1P78414 480 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 HNRNPDQ14103 355 aaKnown RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 PTK2BQ14289 1009 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 EML3Q32P44 896 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 C1QTNF12Q5T7M4 302 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 EGFLAMQ63HQ2 1017 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 BRAT1Q6PJG6 821 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 CCDC110Q8TBZ0 833 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 C1orf74Q96LT6 269 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 KCTD15Q96SI1 283 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 OSBPL9Q96SU4 736 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 EGFL8Q99944 293 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 TRIM7Q9C029 511 aa9.37□□□□□ -0.91
DDX39B-215ENST00000462256 STMN4Q9H169 189 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-215ENST00000462256 IL21Q9HBE4 155 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms