RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 UGT1A5P35504 534 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 ABL2P42684 1182 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 DNA2P51530 1060 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 THOP1P52888 689 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 SNX16P57768 344 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 YPEL5P62699 121 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 ARF5P84085 180 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 SRSF1Q07955 248 aaKnown RBP eCLIP11.03□□□□□ -0.64
CBX3-205ENST00000462165 C1orf61Q13536 156 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 PTPN20Q4JDL3 420 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 ISM2Q6H9L7 571 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 ESRP1Q6NXG1 681 aaKnown RBP11.03□□□□□ -0.64
CBX3-205ENST00000462165 RAB11FIP2Q7L804 512 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 ZDHHC17Q8IUH5 632 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 PASD1Q8IV76 773 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
CBX3-205ENST00000462165 NT5C3BQ969T7 300 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 ISG20Q96AZ6 181 aaKnown RBP11.03□□□□□ -0.64
CBX3-205ENST00000462165 CENPTQ96BT3 561 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 TRIM4Q9C037 500 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 CLPBQ9H078 707 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 ZDHHC6Q9H6R6 413 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 TMEM51Q9NW97 253 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.03□□□□□ -0.644e-9■□□□□ 8.8
CBX3-205ENST00000462165 HECAQ9UBI9 543 aaPredicted RBP11.03□□□□□ -0.64
CBX3-205ENST00000462165 ZNF212Q9UDV6 495 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 STAP1Q9ULZ2 295 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 PAXBP1Q9Y5B6 917 aa11.03□□□□□ -0.64
CBX3-205ENST00000462165 AHCTF1Q8WYP5 2266 aa11.02□□□□□ -0.64
CBX3-205ENST00000462165 C16orf96A6NNT2 1141 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 PPP1R3GB7ZBB8 358 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 TMX2-CTNND1H3BSU7 103 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 TOR1BO14657 336 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 F9P00740 461 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 TSHRP16473 764 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ITGB6P18564 788 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 TFE3P19532 575 aaPredicted RBP11.02□□□□□ -0.65
CBX3-205ENST00000462165 IGFALSP35858 605 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 USP8P40818 1118 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 SULT1E1P49888 294 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 INHBCP55103 352 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 DEUP1Q05D60 604 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ZNF805Q5CZA5 627 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 GJB7Q6PEY0 223 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 MACC1Q6ZN28 852 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 USP53Q70EK8 1073 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 B3GNT8Q7Z7M8 397 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 NELFBQ8WX92 580 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 VOPP1Q96AW1 172 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 SEMA3CQ99985 751 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ARHGAP9Q9BRR9 750 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 SPON2Q9BUD6 331 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 SLC13A1Q9BZW2 595 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 STRADBQ9C0K7 418 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 SYNDIG1Q9H7V2 258 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ATP13A1Q9HD20 1204 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 TMPRSS4Q9NRS4 437 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 GGT7Q9UJ14 662 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 HOOK1Q9UJC3 728 aaKnown RBP11.02□□□□□ -0.65
CBX3-205ENST00000462165 MAN1B1Q9UKM7 699 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 ITM2BQ9Y287 266 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 FCF1Q9Y324 198 aaKnown RBP11.02□□□□□ -0.65
CBX3-205ENST00000462165 ACTL7AQ9Y615 435 aa11.02□□□□□ -0.65
CBX3-205ENST00000462165 TLN1Q9Y490 2541 aaKnown RBP11.01□□□□□ -0.65
CBX3-205ENST00000462165 RELNP78509 3460 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 D6RAR5 112 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 NEMP1O14524 444 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 AREL1O15033 823 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 NVLO15381 856 aaKnown RBP11.01□□□□□ -0.65
CBX3-205ENST00000462165 SUV39H1O43463 412 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 SRGAP2O75044 1071 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 LIPCP11150 499 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 SFTPCP11686 197 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 GKP32189 559 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 CCKBRP32239 447 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 EIF4A3P38919 411 aaKnown RBP11.01□□□□□ -0.65
CBX3-205ENST00000462165 BLKP51451 505 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 GNA12Q03113 381 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 PPARDQ03181 441 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 PTK2Q05397 1052 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 SRSF6Q13247 344 aaKnown RBP11.01□□□□□ -0.65
CBX3-205ENST00000462165 ELOCQ15369 112 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 TGIF1Q15583 401 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 SLC25A52Q3SY17 297 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 COLEC12Q5KU26 742 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 FAXCQ5TGI0 409 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 LVRNQ6Q4G3 990 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 JAMLQ86YT9 394 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 ELOA2Q8IYF1 753 aaPredicted RBP11.01□□□□□ -0.65
CBX3-205ENST00000462165 FSTL5Q8N475 847 aaPredicted RBP11.01□□□□□ -0.65
CBX3-205ENST00000462165 ARL10Q8N8L6 244 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 SHC3Q92529 594 aa11.01□□□□□ -0.65
CBX3-205ENST00000462165 EXTL1Q92935 676 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms