RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-205	ENST00000461934	LIMA1	Q9UHB6	759 aa	Known RBP	13.44	□□□□□ -0.26
UBA3-205	ENST00000461934	RP1	P56715	2156 aa		13.44	□□□□□ -0.26
UBA3-205	ENST00000461934	ZFC3H1	O60293	1989 aa	Known RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	POM121B	A6NF01	834 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	FAM72C	H0Y354	149 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	TM7SF2	O76062	418 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	TMCC1	O94876	653 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	MT-CO3	P00414	261 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	FER	P16591	822 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	TNFAIP3	P21580	790 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	ACTN2	P35609	894 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	YBEY	P58557	167 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	INSM1	Q01101	510 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	COL9A2	Q14055	689 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	MYLK3	Q32MK0	819 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	FAM72A	Q5TYM5	149 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	FAM72D	Q6L9T8	149 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	RBM43	Q6ZSC3	357 aa	Known RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	FAM72B	Q86X60	149 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	SLC22A18AS	Q8N1D0	253 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	RTL3	Q8N8U3	475 aa	Known RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	DENND6B	Q8NEG7	585 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	BTN2A2	Q8WVV5	523 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	GLMN	Q92990	594 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	BMF	Q96LC9	184 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	APOLD1	Q96LR9	279 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	LENG8	Q96PV6	779 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	DEPDC7	Q96QD5	511 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	PCDHB18P	Q96TA0	734 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	IL12RB2	Q99665	862 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	TTYH3	Q9C0H2	523 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	NAT10	Q9H0A0	1025 aa	Known RBP	13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	USP29	Q9HBJ7	922 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	NCKIPSD	Q9NZQ3	722 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	KIF26B	Q2KJY2	2108 aa		13.43	□□□□□ -0.26
UBA3-205	ENST00000461934	ZZEF1	O43149	2961 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934		A0A087WV48	116 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	SCAMP1	O15126	338 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	FGF10	O15520	208 aa	Predicted RBP	13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	CD160	O95971	181 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	MBD3	O95983	291 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	CSF2	P04141	144 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	CKMT1A	P12532	417 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	JUND	P17535	347 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	ABL2	P42684	1182 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	ZNF143	P52747	638 aa	Predicted RBP	13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	TPI1	P60174	286 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	PTP4A2	Q12974	167 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	FGL2	Q14314	439 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	GRM3	Q14832	879 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	RTP5	Q14D33	572 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	PARP15	Q460N3	678 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	ACAD10	Q6JQN1	1059 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	MON1B	Q7L1V2	547 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	VPS36	Q86VN1	386 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	CACTIN-AS1	Q8N1I8	211 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	PYROXD2	Q8N2H3	581 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	LMX1A	Q8TE12	382 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	RFFL	Q8WZ73	363 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	ERGIC2	Q96RQ1	377 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	CNPY3	Q9BT09	278 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	MAGEB5	Q9BZ81	275 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	FZD10	Q9ULW2	581 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	DOLK	Q9UPQ8	538 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	ITM2B	Q9Y287	266 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	CHD6	Q8TD26	2715 aa		13.42	□□□□□ -0.26
UBA3-205	ENST00000461934	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	RASA4B	C9J798	803 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934		K7ESM1	405 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	RIOK3	O14730	519 aa	Known RBP	13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	RAD51B	O15315	384 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	DAPK3	O43293	454 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	AQP9	O43315	295 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	RASA4	O43374	803 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	NEBL	O76041	1014 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	GP1BA	P07359	652 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	HOXB3	P14651	431 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	NME1	P15531	152 aa	Known RBP	13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	ELP6	Q0PNE2	266 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	FZD2	Q14332	565 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	FILIP1L	Q4L180	1135 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	INO80D	Q53TQ3	878 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	LRRC73	Q5JTD7	316 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	ARTN	Q5T4W7	220 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	CCDC183	Q5T5S1	534 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	FAXC	Q5TGI0	409 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	DNAAF5	Q86Y56	855 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	AOPEP	Q8N6M6	819 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	IFI44	Q8TCB0	444 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	MAPK15	Q8TD08	544 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	ASB12	Q8WXK4	309 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	C1QTNF2	Q9BXJ5	285 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	SLC13A1	Q9BZW2	595 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	SPAST	Q9UBP0	616 aa		13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	UBA2	Q9UBT2	640 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA3-205	ENST00000461934	APOBEC3B	Q9UH17	382 aa	Known RBP	13.41	□□□□□ -0.26

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