RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 K7ENM7 598 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 M0QZ92 97 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 TBCAO75347 108 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 NEBLO76041 1014 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 FGF18O76093 207 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 GASTP01350 101 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PRKCBP05771 671 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 H2AFXP16104 143 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 ATF7P17544 494 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 ARF4P18085 180 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 TMOD1P28289 359 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 CRHR1P34998 444 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 CHKAP35790 457 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PBX3P40426 434 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 MAN2A2P49641 1150 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 SCNN1GP51170 649 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 MAPK10P53779 464 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 WNT3AP56704 352 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 SLC8A3P57103 927 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 NANOS3P60323 173 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 POU5F1BQ06416 359 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 SPAG1Q07617 926 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 STK4Q13043 487 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 COASYQ13057 564 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 IFT88Q13099 833 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PPIGQ13427 754 aaKnown RBP eCLIP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 DAG1Q14118 895 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 TBC1D25Q3MII6 688 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 HERC4Q5GLZ8 1057 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 NAIF1Q69YI7 327 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 Q6ZPA2 131 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 Q6ZRM9 215 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 HTR3DQ70Z44 454 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 GET4Q7L5D6 327 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 HAUS6Q7Z4H7 955 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 CLEC14AQ86T13 490 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PPP1R3BQ86XI6 285 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 ANKRD13BQ86YJ7 626 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 LIX1LQ8IVB5 337 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 NELFCDQ8IXH7 590 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 IQCF2Q8IXL9 164 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 MYOCDQ8IZQ8 938 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 CCDC33Q8N5R6 958 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 RNF152Q8N8N0 203 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 TMEM161BQ8NDZ6 487 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 CNNM3Q8NE01 707 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 MCPH1Q8NEM0 835 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 BRIX1Q8TDN6 353 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 CCT6BQ92526 530 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 SEPT8Q92599 483 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 ARL8AQ96BM9 186 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 EEF2KMTQ96G04 330 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 MRGPRX1Q96LB2 322 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 AGAP2Q99490 1192 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 GCOM2Q9BZD3 368 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 NXF3Q9H4D5 531 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PDZD7Q9H5P4 517 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 CASS4Q9NQ75 786 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 SLC2A4RGQ9NR83 387 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 TMEM140Q9NV12 185 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PANK4Q9NVE7 773 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PIH1D1Q9NWS0 290 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 MIOSQ9NXC5 875 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 ING3Q9NXR8 418 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 AJAP1Q9UKB5 411 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 MTUS1Q9ULD2 1270 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 REXO2Q9Y3B8 237 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PCDHGB2Q9Y5G2 931 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 DMRT1Q9Y5R6 373 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 PRRC2BQ5JSZ5 2229 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 TRANK1O15050 2925 aa5.06□□□□□ -1.6
ATPAF1-203ENST00000460928 EPOPA6NHQ4 379 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 EIF3CLB5ME19 914 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 F8W8V4 182 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 K7ERI5 159 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ITGA10O75578 1167 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 GCNT3O95395 438 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 RPN1P04843 607 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 TSHRP16473 764 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 KRT4P19013 534 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MUTP22033 750 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 PTPN7P35236 360 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 TNFSF9P41273 254 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 NAMPTP43490 491 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 KIR2DL3P43628 341 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 RENBPP51606 427 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MNAT1P51948 309 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ZNF131P52739 623 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 BPIFB4P59827 614 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 CTXN1P60606 82 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 SLC25A3Q00325 362 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 DMP1Q13316 513 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 BIRC3Q13489 604 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 MTM1Q13496 603 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 IQCB1Q15051 598 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 ELF2Q15723 593 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 PREPLQ4J6C6 727 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 CLLU1OSQ5K130 101 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 HHATQ5VTY9 493 aa5.05□□□□□ -1.6
ATPAF1-203ENST00000460928 TWF2Q6IBS0 349 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms