RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 DPYSL4O14531 572 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 CD300CQ08708 224 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 GALNT2Q10471 571 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 NFATC3Q12968 1075 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 ZBTB17Q13105 803 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 ERMP1Q7Z2K6 904 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.66■□□□□ 0.1
SSR4-206ENST00000460616 ACVR1CQ8NER5 493 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 ZNF669Q96BR6 464 aaPredicted RBP15.66■□□□□ 0.1
SSR4-206ENST00000460616 SCYL1Q96KG9 808 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 C1orf50Q9BV19 199 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 TDRD1Q9BXT4 1180 aaKnown RBP15.66■□□□□ 0.1
SSR4-206ENST00000460616 EIF2AQ9BY44 585 aaKnown RBP15.66■□□□□ 0.1
SSR4-206ENST00000460616 UPF3AQ9H1J1 476 aaKnown RBP15.66■□□□□ 0.1
SSR4-206ENST00000460616 ZNF302Q9NR11 478 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 NCKIPSDQ9NZQ3 722 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 SFMBT1Q9UHJ3 866 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 CPA4Q9UI42 421 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 TLK1Q9UKI8 766 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 SARDHQ9UL12 918 aa15.66■□□□□ 0.1
SSR4-206ENST00000460616 C1orf232A0A0U1RR37 186 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 RNF103-CHMP3A0A140T963 221 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 TRPC5OSA6NMA1 111 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 TMEM233B4DJY2 109 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 TIMM44O43615 452 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 CNOT3O75175 753 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 DDHD2O94830 711 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 SBK3P0C264 359 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 HSPA8P11142 646 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 MAP4P27816 1152 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 GRIA3P42263 894 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 GLRBP48167 497 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 GNA12Q03113 381 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 NME3Q13232 169 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 TAF1CQ15572 869 aaPredicted RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 DPYSL2Q16555 572 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 DGKDQ16760 1214 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 SLC36A3Q495N2 470 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 SAMD4BQ5PRF9 694 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 C6orf10Q5SRN2 563 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 INTS11Q5TA45 600 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 REP15Q6BDI9 236 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 RIOX2Q8IUF8 465 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 ZC3H7AQ8IWR0 971 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 TSNARE1Q96NA8 513 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 CSPG4P5Q96PW8 444 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 LRRC40Q9H9A6 602 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 ATAD3AQ9NVI7 634 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 GIN1Q9NXP7 522 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 HESX1Q9UBX0 185 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 SLC39A10Q9ULF5 831 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 B3GNT3Q9Y2A9 372 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 MFHAS1Q9Y4C4 1052 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 RNF103O00237 685 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 CCNA2P20248 432 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 SAT1P21673 171 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 PSMB4P28070 264 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 MAPRE2Q15555 327 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 TRIM16LQ309B1 348 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 FAM117BQ6P1L5 589 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 TMEM130Q8N3G9 435 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 KDM1BQ8NB78 822 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 OR2T34Q8NGX1 318 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 OR2T3Q8NH03 318 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 FAM110BQ8TC76 370 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 C17orf50Q8WW18 174 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 CYGBQ8WWM9 190 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 SNX27Q96L92 541 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 PARK7Q99497 189 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 TMEM9Q9P0T7 183 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 SIX4Q9UIU6 781 aa15.65■□□□□ 0.1
SSR4-206ENST00000460616 RUVBL2Q9Y230 463 aaKnown RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 MAFBQ9Y5Q3 323 aaPredicted RBP15.65■□□□□ 0.1
SSR4-206ENST00000460616 HACD1B0YJ81 288 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 SDHDO14521 159 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 NRP1O14786 923 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 B4GALT4O60513 344 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 CLIC3O95833 236 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 HDCP19113 662 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 EFNA5P52803 228 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 RPS3AP61247 264 aaKnown RBP15.64■□□□□ 0.09
SSR4-206ENST00000460616 NEDD8Q15843 81 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 NCBP2-AS2Q69YL0 99 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 GALNT18Q6P9A2 607 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 ABRAXAS1Q6UWZ7 409 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 LAYNQ6UX15 382 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 SCUBE3Q8IX30 993 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 COLGALT2Q8IYK4 626 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 CCNYL1Q8N7R7 359 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 ANKRD52Q8NB46 1076 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 CXorf38Q8TB03 319 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 MAELQ96JY0 434 aaKnown RBP15.64■□□□□ 0.09
SSR4-206ENST00000460616 DNAI2Q9GZS0 605 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 MUC3BQ9H195 1237 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 ADAMTS10Q9H324 1103 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 ACAD9Q9H845 621 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 RIC8BQ9NVN3 520 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 CCDC167Q9P0B6 97 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 SEPT10Q9P0V9 454 aa15.64■□□□□ 0.09
SSR4-206ENST00000460616 GOLGA8TH3BQL2 631 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms