RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 LRRC6Q86X45 466 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 CYP4X1Q8N118 509 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 PPHLN1Q8NEY8 458 aaKnown RBP24.71■■□□□ 1.55
U2AF1-204ENST00000459639 ZNF669Q96BR6 464 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-204ENST00000459639 LRRC3BQ96PB8 259 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 TRPV4Q9HBA0 871 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 NOD2Q9HC29 1040 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 SCUBE2Q9NQ36 999 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 DUS2Q9NX74 493 aaKnown RBP24.71■■□□□ 1.55
U2AF1-204ENST00000459639 INTS6Q9UL03 887 aaKnown RBP24.71■■□□□ 1.55
U2AF1-204ENST00000459639 IKBKGQ9Y6K9 419 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 HLA-DPA1P20036 260 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 CHRNA4P43681 627 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 PPP2R2AP63151 447 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 CDK18Q07002 472 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 SLC20A2Q08357 652 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 NAB1Q13506 487 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 ANKRD20A4Q4UJ75 823 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 CHRDL2Q6WN34 429 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 KDELC2Q7Z4H8 507 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.7■■□□□ 1.54
U2AF1-204ENST00000459639 BPIFB1Q8TDL5 484 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 MRRFQ96E11 262 aaKnown RBP24.7■■□□□ 1.54
U2AF1-204ENST00000459639 IFT43Q96FT9 208 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 SLC2A11Q9BYW1 496 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 SMYD2Q9NRG4 433 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 ADAM21Q9UKJ8 722 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 FAM169AQ9Y6X4 670 aa24.7■■□□□ 1.54
U2AF1-204ENST00000459639 INHBAP08476 426 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 ATXN1LP0C7T5 689 aaKnown RBP24.69■■□□□ 1.54
U2AF1-204ENST00000459639 VIPR2P41587 438 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 SCNN1BP51168 640 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 RHOAP61586 193 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 PKN3Q6P5Z2 889 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 EXOC3L1Q86VI1 746 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 SLC26A11Q86WA9 606 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 CTAGE3PQ8IX95 158 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 SLC25A41Q8N5S1 370 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 PPM1NQ8N819 430 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 CDKL2Q92772 493 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 EXOC2Q96KP1 924 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 RANBP9Q96S59 729 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 ZNF180Q9UJW8 692 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 GGA2Q9UJY4 613 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 TCAF1Q9Y4C2 921 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 ACTL7BQ9Y614 415 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 DENND4AQ7Z401 1863 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 ZCWPW2A0A1B0GU75 182 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 PIAS1O75925 651 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 FGF1P05230 155 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 DMC1Q14565 340 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 POU6F1Q14863 301 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 EML3Q32P44 896 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 SIRPB2Q5JXA9 342 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 MARK2Q7KZI7 788 aaKnown RBP24.69■■□□□ 1.54
U2AF1-204ENST00000459639 CERS2Q96G23 380 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 FCRL3Q96P31 734 aaPredicted RBP24.69■■□□□ 1.54
U2AF1-204ENST00000459639 CHRAC1Q9NRG0 131 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 PRKAG3Q9UGI9 489 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 CDH22Q9UJ99 828 aa24.69■■□□□ 1.54
U2AF1-204ENST00000459639 FCF1Q9Y324 198 aaKnown RBP24.69■■□□□ 1.54
U2AF1-204ENST00000459639 DOCK8Q8NF50 2099 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 CXorf49A8MYA2 514 aaPredicted RBP24.68■■□□□ 1.54
U2AF1-204ENST00000459639 PABPC1P11940 636 aaKnown RBP24.68■■□□□ 1.54
U2AF1-204ENST00000459639 ADRA1DP25100 572 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 MGAT5Q09328 741 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 DHCR24Q15392 516 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 FUT11Q495W5 492 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 ASTLQ6HA08 431 aaPredicted RBP24.68■■□□□ 1.54
U2AF1-204ENST00000459639 CES3Q6UWW8 571 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.68■■□□□ 1.54
U2AF1-204ENST00000459639 TRIB3Q96RU7 358 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 SENP1Q9P0U3 644 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 CDH7Q9ULB5 785 aa24.68■■□□□ 1.54
U2AF1-204ENST00000459639 ARIH1Q9Y4X5 557 aaPredicted RBP24.68■■□□□ 1.54
U2AF1-204ENST00000459639 NDST3O95803 873 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 ADH1CP00326 375 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 MT-CO1P00395 513 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 CYP17A1P05093 508 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 ATAT1Q5SQI0 421 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 CES5AQ6NT32 575 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 TRABD2AQ86V40 505 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 MFSD3Q96ES6 412 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 TDRD1Q9BXT4 1180 aaKnown RBP24.67■■□□□ 1.54
U2AF1-204ENST00000459639 CLEC1BQ9P126 229 aa24.67■■□□□ 1.54
U2AF1-204ENST00000459639 IQANK1A0A1B0GTG1 560 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 HEATR9A2RTY3 570 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 HOXC11O43248 304 aaPredicted RBP24.66■■□□□ 1.54
U2AF1-204ENST00000459639 KRT15P19012 456 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 FCARP24071 287 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 NMBRP28336 390 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 SULT2A1Q06520 285 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 MSLNQ13421 630 aaPredicted RBP24.66■■□□□ 1.54
U2AF1-204ENST00000459639 NCEH1Q6PIU2 408 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 KIAA0907Q7Z7F0 614 aaPredicted RBP24.66■■□□□ 1.54
U2AF1-204ENST00000459639 UNC5BQ8IZJ1 945 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 NSMCE3Q96MG7 304 aa24.66■■□□□ 1.54
U2AF1-204ENST00000459639 CNOT10Q9H9A5 744 aaKnown RBP24.66■■□□□ 1.54
U2AF1-204ENST00000459639 PPANQ9NQ55 473 aaKnown RBP24.66■■□□□ 1.54
U2AF1-204ENST00000459639 HS3ST2Q9Y278 367 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms