RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ARSIQ5FYB1 569 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 ITPRIPL1Q6GPH6 555 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 NCEH1Q6PIU2 408 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 GDPD4Q6W3E5 623 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 ADAT2Q7Z6V5 191 aaKnown RBP14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 PGBD5Q8N414 524 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 CNTD1Q8N815 330 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 PRELID2Q8N945 189 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 FAM131CQ96AQ9 280 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF419Q96HQ0 510 aaPredicted RBP14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 MS4A14Q96JA4 679 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 SLC25A51Q9H1U9 297 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 SCUBE2Q9NQ36 999 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 DYRK4Q9NR20 520 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 SEPT10Q9P0V9 454 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 USP36Q9P275 1121 aaKnown RBP14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 EVLQ9UI08 416 aaPredicted RBP14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 FZD4Q9ULV1 537 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF148Q9UQR1 794 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 NCKAP1Q9Y2A7 1128 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 PCDHGA2Q9Y5H1 932 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 MYO18AQ92614 2054 aaKnown RBP14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 MUC22E2RYF6 1773 aaPredicted RBP14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 TSPAN11A1L157 253 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 KCNN4O15554 427 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 GCATO75600 419 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 CTSLP07711 333 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 SERPINF2P08697 491 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 SP9P0CG40 484 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 RGRP47804 291 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 PSMD8P48556 350 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 BCL2L1Q07817 233 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 ITKQ08881 620 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 BRAT1Q6PJG6 821 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 KIAA1324Q6UXG2 1013 aaKnown RBP14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 C4orf22Q6V702 233 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 ARRDC2Q8TBH0 407 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 GRIN3AQ8TCU5 1115 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 LRRN4Q8WUT4 740 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 C1orf54Q8WWF1 131 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 VOPP1Q96AW1 172 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 IMP4Q96G21 291 aaKnown RBP14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 EXOC2Q96KP1 924 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 SPATA13Q96N96 652 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 AGAP3Q96P47 875 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 SEMA3CQ99985 751 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 SUV39H2Q9H5I1 410 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 ZDHHC6Q9H6R6 413 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 NOD2Q9HC29 1040 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 GLOD4Q9HC38 313 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 VPS45Q9NRW7 570 aa14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 KLHL8Q9P2G9 620 aaPredicted RBP14.47□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF318Q5VUA4 2279 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 CACNA1IQ9P0X4 2223 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 KPNA3O00505 521 aaPredicted RBP14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF185O15231 689 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 MID1O15344 667 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 HTRA2O43464 458 aaPredicted RBP14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 NFKBIAP25963 317 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 FNTAP49354 379 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 TPMTP51580 245 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 POLR2LP62875 67 aaKnown RBP14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 P3H1Q32P28 736 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 TSSK4Q6SA08 328 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 PID1Q7Z2X4 250 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF567Q8N184 647 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 FAM71DQ8N9W8 422 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 ZBTB44Q8NCP5 570 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 ATL2Q8NHH9 583 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 KIF18AQ8NI77 898 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 ATG4AQ8WYN0 398 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 RAB7BQ96AH8 199 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 ECHDC3Q96DC8 303 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 SPACA7Q96KW9 195 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 FCRL5Q96RD9 977 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 OMDQ99983 421 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 FAM118BQ9BPY3 351 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 TMEM121Q9BTD3 319 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 PCED1AQ9H1Q7 454 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 SGK2Q9HBY8 427 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 FBXL12Q9NXK8 326 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 SARDHQ9UL12 918 aa14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 TPX2Q9ULW0 747 aaKnown RBP14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 ARIH1Q9Y4X5 557 aaPredicted RBP14.46□□□□□ -0.09
HMGXB4-204ENST00000455359 NUP205Q92621 2012 aa14.46□□□□□ -0.1
HMGXB4-204ENST00000455359 MIA3Q5JRA6 1907 aa14.46□□□□□ -0.1
HMGXB4-204ENST00000455359 CCDC188H7C350 402 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 UGT2B4P06133 528 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 ACTN2P35609 894 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 P2RY2P41231 377 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 FNTBP49356 437 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 NEK3P51956 506 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 MAXP61244 160 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 RPL26P61254 145 aaKnown RBP14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 MAP7D1Q3KQU3 841 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 SPDYCQ5MJ68 293 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 ANKRD20A2Q5SQ80 823 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 CFAP58Q5T655 872 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 ANKRD20A1Q5TYW2 823 aa14.45□□□□□ -0.1
HMGXB4-204ENST00000455359 ANKRD20A3Q5VUR7 823 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms