RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 VSTM1Q6UX27 236 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 CRELD2Q6UXH1 353 aaPredicted RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 DENND5BQ6ZUT9 1274 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 USP30Q70CQ3 517 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 TMEM86AQ8N2M4 240 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 PDCL2Q8N4E4 241 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 ZNF808Q8N4W9 903 aaPredicted RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 ZCCHC9Q8N567 271 aaKnown RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 SYT2Q8N9I0 419 aaPredicted RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 SNRNP27Q8WVK2 155 aaKnown RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 FGF11Q92914 225 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 NXPE2Q96DL1 559 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 FIZ1Q96SL8 496 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 MMTAG2Q9BU76 263 aaKnown RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 OR10A5Q9H207 317 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 OR10A2Q9H208 303 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 ITM2CQ9NQX7 267 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 UCKL1Q9NWZ5 548 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 GDAP2Q9NXN4 497 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 DDX43Q9NXZ2 648 aaKnown RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 DPP3Q9NY33 737 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 TRPM5Q9NZQ8 1165 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 KCND2Q9NZV8 630 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 SIRPGQ9P1W8 387 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 LARSQ9P2J5 1176 aaKnown RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 DEC1Q9P2X7 70 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 LRWD1Q9UFC0 647 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 Q9UFV3 132 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 CDC42EP3Q9UKI2 254 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 L1RE1Q9UN81 338 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.9□□□□□ -1.79
RBM39-220ENST00000455343 STYXL1Q9Y6J8 313 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 PTPRQQ9UMZ3 2332 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 NUP205Q92621 2012 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 NUP210Q8TEM1 1887 aaPredicted RBP3.9□□□□□ -1.79
RBM39-220ENST00000455343 TEX15Q9BXT5 2789 aa3.9□□□□□ -1.79
RBM39-220ENST00000455343 BOD1L1Q8NFC6 3051 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 USP9XQ93008 2570 aaPredicted RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 UBR5O95071 2799 aaPredicted RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 ARID2Q68CP9 1835 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 A0A1B0GVT2 93 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 PP2D1A8MPX8 630 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 WASH3PC4AMC7 463 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 PRRT4C9JH25 899 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 H0YCG3 227 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 HNRNPDLO14979 420 aaKnown RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 HCRTO43612 131 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 CACNG3O60359 315 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 NDUFS2O75306 463 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 C1SP09871 688 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 CISD3P0C7P0 127 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 ZDHHC11BP0C7U3 371 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 CDK4P11802 303 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 ACAT1P24752 427 aaKnown RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 MSX2P35548 267 aaPredicted RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 PNPLA4P41247 253 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 WASP42768 502 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 TRAPPC10P48553 1259 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 LHX1P48742 406 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 CSNK1EP49674 416 aaKnown RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 ACOT2P49753 483 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 LIG4P49917 911 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 MEOX1P50221 254 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 CSRP3P50461 194 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 TPMTP51580 245 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 ZNF132P52740 706 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 SLC12A3P55017 1021 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 DGCR2P98153 550 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 GTF2BQ00403 316 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 RHDQ02161 417 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 SEMG2Q02383 582 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 HGFACQ04756 655 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 KDSRQ06136 332 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 FOXL1Q12952 345 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 TARDBPQ13148 414 aaKnown RBP eCLIP3.89□□□□□ -1.79
RBM39-220ENST00000455343 SERINC3Q13530 473 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 ZNF174Q15697 407 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 IL17AQ16552 155 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 KIF19Q2TAC6 998 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 C10orf76Q5T2E6 689 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 DCAF12L1Q5VU92 463 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 SNX30Q5VWJ9 437 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 SKAP1Q86WV1 359 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 ERICH1Q86X53 443 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 DDX42Q86XP3 938 aaKnown RBP eCLIP3.89□□□□□ -1.792e-6■□□□□ 9.8
RBM39-220ENST00000455343 TMEM25Q86YD3 366 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 SPATA2LQ8IUW3 424 aaPredicted RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 FMNL3Q8IVF7 1028 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 BBS7Q8IWZ6 715 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 CHPFQ8IZ52 775 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 LRRC52Q8N7C0 313 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 NSUN7Q8NE18 718 aaKnown RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 IL17DQ8TAD2 202 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 CACTINQ8WUQ7 758 aaKnown RBP3.89□□□□□ -1.79
RBM39-220ENST00000455343 ASB15Q8WXK1 588 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 RFFLQ8WZ73 363 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 IGSF8Q969P0 613 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 HIC2Q96JB3 615 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 C8orf48Q96LL4 319 aa3.89□□□□□ -1.79
RBM39-220ENST00000455343 ZNF560Q96MR9 790 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms