RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TP73O15350 636 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 MT-CYBP00156 380 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 SERPINF2P08697 491 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 NTSR1P30989 418 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 RECQLP46063 649 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 GEMP55040 296 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 MPP3Q13368 585 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 FZD5Q13467 585 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 MYLK3Q32MK0 819 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 C2orf27AQ580R0 203 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 IZUMO3Q5VZ72 239 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 KDELC1Q6UW63 502 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 PCGF5Q86SE9 256 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 UBXN4Q92575 508 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 TUBGCP5Q96RT8 1024 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 UHRF1Q96T88 793 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 CPEB1Q9BZB8 566 aaKnown RBP16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 DPH5Q9H2P9 285 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 ANKZF1Q9H8Y5 726 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 GDF3Q9NR23 364 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 GRHL1Q9NZI5 618 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 WHRNQ9P202 907 aa16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 EVLQ9UI08 416 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-202ENST00000455220 ESYT3A0FGR9 886 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 NDC80O14777 642 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 SIN3BO75182 1162 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 POP4O95707 220 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 AP2A1O95782 977 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 EPHX1P07099 455 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 ITIH2P19823 946 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 TPSB2P20231 275 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 LRRC32Q14392 662 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 ELAVL3Q14576 367 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 TPSAB1Q15661 275 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 HIBCHQ6NVY1 386 aaPredicted RBP16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 HOOK3Q86VS8 718 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 PPIL6Q8IXY8 311 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 NAT8LQ8N9F0 302 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 CHST14Q8NCH0 376 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 BBOF1Q8ND07 529 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 OR6K2Q8NGY2 324 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 RUBCNQ92622 972 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 OSBPL6Q9BZF3 934 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 TBC1D17Q9HA65 648 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 EPB41L5Q9HCM4 733 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 UBP1Q9NZI7 540 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 MTF2Q9Y483 593 aaPredicted RBP16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 BDP1A6H8Y1 2624 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 ANKRD36A6QL64 1941 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 TTC28Q96AY4 2481 aa16.78■□□□□ 0.28
CCDC90B-202ENST00000455220 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 GOLGA6CA6NDK9 693 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 GOLGA6BA6NDN3 693 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 ALOX15BO15296 676 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 PSMD3O43242 534 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 ADAM23O75077 832 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 SUN1O94901 812 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 KLF8O95600 359 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 APRTP07741 180 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 GOLGA6DP0CG33 693 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 CDK16Q00536 496 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 RAD51Q06609 339 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 SIGLEC14Q08ET2 396 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 CAMK2GQ13555 558 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 GRM3Q14832 879 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 MORF4L2Q15014 288 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 TRADDQ15628 312 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 ERCC6LQ2NKX8 1250 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 ANKRD22Q5VYY1 191 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 PDCD7Q8N8D1 485 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 TXNDC5Q8NBS9 432 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 RPLP0P6Q8NHW5 317 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 LRIG1Q96JA1 1093 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 MRGPRX2Q96LB1 330 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 HINFPQ9BQA5 517 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 HEPHQ9BQS7 1158 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 TDRD1Q9BXT4 1180 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 FOXQ1Q9C009 403 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 PRSS16Q9NQE7 514 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 FAM114A2Q9NRY5 505 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 GOLGA6AQ9NYA3 693 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 SHOC2Q9UQ13 582 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 WASF2Q9Y6W5 498 aa16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 V9GYY5 206 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-202ENST00000455220 TCRBV7S3A2A0A539 114 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 FAM170BA6NMN3 283 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 E7EVH7 732 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 SMAPO00193 183 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 TRAFD1O14545 582 aaPredicted RBP16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 HTRA2O43464 458 aaPredicted RBP16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 BNIP3LO60238 219 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 SOCS5O75159 536 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 TMEM63AO94886 807 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 ADRA1AP35348 466 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 ITGA8P53708 1063 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 WNT3AP56704 352 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 UBXN2BQ14CS0 331 aa16.77■□□□□ 0.27
CCDC90B-202ENST00000455220 SDE2Q6IQ49 451 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms