RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TEX26Q8N6G2 289 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 C12orf50Q8NA57 414 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-205ENST00000454542 TSEN2Q8NCE0 465 aaKnown RBP14.36□□□□□ -0.11
HDAC4-205ENST00000454542 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 HDAC11Q96DB2 347 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 OLFM3Q96PB7 478 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 TSGA13Q96PP4 275 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 EDEM2Q9BV94 578 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 CINPQ9BW66 212 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-205ENST00000454542 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 DLL3Q9NYJ7 618 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 DKK3Q9UBP4 350 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 EIF2B4Q9UI10 523 aaKnown RBP14.36□□□□□ -0.11
HDAC4-205ENST00000454542 SLC6A14Q9UN76 642 aa14.36□□□□□ -0.11
HDAC4-205ENST00000454542 A0A0U1RQJ8 604 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 C16orf96A6NNT2 1141 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 KRIT1O00522 736 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 AREL1O15033 823 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 GDF9O60383 454 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 FSBPO95073 299 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 GNSP15586 552 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 CTNNA2P26232 953 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 NUDT1P36639 197 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 GRIA4P48058 902 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 IRX4P78413 519 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 BNC1Q01954 994 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 RAD51Q06609 339 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC4-205ENST00000454542 CCDC15Q0P6D6 951 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 SLC10A2Q12908 348 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-205ENST00000454542 GRM3Q14832 879 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 AASDHQ4L235 1098 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-205ENST00000454542 TMEM259Q4ZIN3 620 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 GDPD4Q6W3E5 623 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 ZSCAN30Q86W11 494 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 TXLNBQ8N3L3 684 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 PGBD5Q8N414 524 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 HCAR2Q8TDS4 363 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 KRT35Q92764 455 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 RAB7BQ96AH8 199 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 ECHDC3Q96DC8 303 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 NSMCE3Q96MG7 304 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 TUBGCP5Q96RT8 1024 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 NUSAP1Q9BXS6 441 aaKnown RBP14.35□□□□□ -0.11
HDAC4-205ENST00000454542 TM9SF3Q9HD45 589 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 FADS3Q9Y5Q0 445 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 ADGRG1Q9Y653 693 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 ADAMTS9Q9P2N4 1935 aa14.35□□□□□ -0.11
HDAC4-205ENST00000454542 GON4LQ3T8J9 2241 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 hCG_1818297A0A087WSY0 165 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 SLC30A4O14863 429 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 BCAT2O15382 392 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 PIGNO95427 931 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 ENGP17813 658 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 MX2P20592 715 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 MAPK8P45983 427 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 AP1S1P61966 158 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 CCZ1BP86790 482 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 CCZ1P86791 482 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 PPIDQ08752 370 aaKnown RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 HNRNPDQ14103 355 aaKnown RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 PPP2R5EQ16537 467 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 IFI16Q16666 785 aaKnown RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 RALGPS1Q5JS13 557 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 TIGD7Q6NT04 549 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 SPOCD1Q6ZMY3 1216 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 DAAM2Q86T65 1068 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 KIAA1328Q86T90 577 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 SRLQ86TD4 932 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 RYBPQ8N488 228 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 EXD1Q8NHP7 514 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 SNX19Q92543 992 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 ZNF641Q96N77 438 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 KLHL32Q96NJ5 620 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 TRIM10Q9UDY6 481 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 AMACRQ9UHK6 382 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 ZFR2Q9UPR6 939 aaKnown RBP14.34□□□□□ -0.11
HDAC4-205ENST00000454542 DMTF1Q9Y222 760 aa14.34□□□□□ -0.11
HDAC4-205ENST00000454542 A0A1W2PR77 199 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 FAM47DPA6NHR8 397 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 TRAFD1O14545 582 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-205ENST00000454542 ARHGAP33O14559 1287 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 CDX4O14627 284 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-205ENST00000454542 APOL1O14791 398 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 GJB3O75712 270 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 MAP3K6O95382 1288 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 CFIP05156 583 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 ZFXP17010 805 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-205ENST00000454542 CCNCP24863 283 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 PTPN7P35236 360 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 MMP13P45452 471 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 RENBPP51606 427 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 SUOXP51687 545 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 AFF3P51826 1226 aaKnown RBP14.33□□□□□ -0.12
HDAC4-205ENST00000454542 RACK1P63244 317 aaKnown RBP14.33□□□□□ -0.12
HDAC4-205ENST00000454542 KIF5AQ12840 1032 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 GRIK2Q13002 908 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 ZNF235Q14590 738 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms