RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 H7C4K7 107 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 DNAJC6O75061 913 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 UBOX5O94941 541 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 UPP2O95045 317 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 TGDSO95455 350 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 PDHA1P08559 390 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 SNRPAP09012 282 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 MX2P20592 715 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 KCNA5P22460 613 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 MSH2P43246 934 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 CCR10P46092 362 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 ZRSR2Q15696 482 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 PARP15Q460N3 678 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 RBM20Q5T481 1227 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 FYB2Q5VWT5 728 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 LEKR1Q6ZMV7 388 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 ARHGAP18Q8N392 663 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 SLC22A17Q8WUG5 538 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 PLD4Q96BZ4 506 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 KLHL8Q9P2G9 620 aaPredicted RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 ATP11BQ9Y2G3 1177 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 LRP4O75096 1905 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 TICRRQ7Z2Z1 1910 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 SLC12A8A0AV02 714 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 MTSS1O43312 755 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 DNAJC8O75937 253 aaPredicted RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 JUNP05412 331 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 CPB1P15086 417 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 MZF1P28698 734 aaPredicted RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 CDKN2DP55273 166 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 WNT3AP56704 352 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 MESP2Q0VG99 397 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 AGERQ15109 404 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 SPDYAQ5MJ70 313 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 TMEM215Q68D42 235 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 RWDD4Q6NW29 188 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 CHST9Q7L1S5 443 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 SPATA21Q7Z572 469 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 DNAJB7Q7Z6W7 309 aaPredicted RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 TTC7BQ86TV6 843 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 LRRC49Q8IUZ0 686 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 ATPAF2Q8N5M1 289 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP46-202ENST00000451218 ANKRD49Q8WVL7 239 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 MTBPQ96DY7 904 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 C7orf26Q96N11 449 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 CPNE1Q99829 537 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 OMDQ99983 421 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 CATSPERBQ9H7T0 1116 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 IL23AQ9NPF7 189 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 ARHGEF3Q9NR81 526 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 TLR9Q9NR96 1032 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 HCFC1R1Q9NWW0 138 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 RPS6KL1Q9Y6S9 549 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 FGF18O76093 207 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 CORO1AP31146 461 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 IRS1P35568 1242 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 LEPRP48357 1165 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 NPY2RP49146 381 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 HARS2P49590 506 aaKnown RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 SLC7A9P82251 487 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 CDH17Q12864 832 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 SF3A3Q12874 501 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP46-202ENST00000451218 IFT88Q13099 833 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 MPP3Q13368 585 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 TYSND1Q2T9J0 566 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 ARMC3Q5W041 872 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 KIAA0930Q6ICG6 404 aaPredicted RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 ACMSDQ8TDX5 336 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 RSPRY1Q96DX4 576 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 PSKH2Q96QS6 385 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 FICDQ9BVA6 458 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 STMN4Q9H169 189 aaPredicted RBP6.66□□□□□ -1.34
USP46-202ENST00000451218 ATXN3LQ9H3M9 355 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 RETREG1Q9H6L5 497 aa6.66□□□□□ -1.34
USP46-202ENST00000451218 C2CD2LO14523 706 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 HAUS5O94927 633 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 PAPSS2O95340 614 aaPredicted RBP6.65□□□□□ -1.34
USP46-202ENST00000451218 TSPAN12O95859 305 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 ATP5DP30049 168 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 CD86P42081 329 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 FOXK1P85037 733 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 XIAPP98170 497 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 BST1Q10588 318 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 LBRQ14739 615 aaKnown RBP6.65□□□□□ -1.34
USP46-202ENST00000451218 HSP90AA5PQ58FG0 334 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 C10orf120Q5SQS8 335 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 TRPM8Q7Z2W7 1104 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 KCNMB4Q86W47 210 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 TREML1Q86YW5 311 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 CCNJLQ8IV13 435 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 MAPK15Q8TD08 544 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 ALKBH8Q96BT7 664 aaKnown RBP6.65□□□□□ -1.34
USP46-202ENST00000451218 ZNF707Q96C28 371 aaPredicted RBP6.65□□□□□ -1.34
USP46-202ENST00000451218 SMC6Q96SB8 1091 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 TDRD1Q9BXT4 1180 aaKnown RBP6.65□□□□□ -1.34
USP46-202ENST00000451218 NOD2Q9HC29 1040 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 TMEM39AQ9NV64 488 aa6.65□□□□□ -1.34
USP46-202ENST00000451218 RBM22Q9NW64 420 aaKnown RBP eCLIP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms