RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ZMPSTE24O75844 475 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 LRIG2O94898 1065 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 RARAP10276 462 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 RHOQP17081 205 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 DNA2P51530 1060 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 C21orf59P57076 290 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 RACK1P63244 317 aaKnown RBP17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 ARF5P84085 180 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 IL9RQ01113 521 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 KRT81Q14533 505 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 PDK2Q15119 407 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 C22orf39Q6P5X5 142 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 ZNF783Q6ZMS7 281 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 LEKR1Q6ZMV7 388 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 KCTD6Q8NC69 237 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 HES6Q96HZ4 224 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 SERAC1Q96JX3 654 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 NAPGQ99747 312 aaPredicted RBP17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 SCNM1Q9BWG6 230 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 ACE2Q9BYF1 805 aaPredicted RBP17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 DHX35Q9H5Z1 703 aaKnown RBP17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 WASF3Q9UPY6 502 aa17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 FCF1Q9Y324 198 aaKnown RBP17.34■□□□□ 0.37
PRPF40A-204ENST00000450303 C10orf142B7Z368 130 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 VILLO15195 856 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 PLRG1O43660 514 aaKnown RBP17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 RRP9O43818 475 aaKnown RBP17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 ZRANB2O95218 330 aaKnown RBP eCLIP17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 IL1R2P27930 398 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 CTSKP43235 329 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 NRG1Q02297 640 aaPredicted RBP17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 SMTNL2Q2TAL5 461 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 ARSIQ5FYB1 569 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 AGBL4Q5VU57 503 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 RETSATQ6NUM9 610 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 DPY19L3Q6ZPD9 716 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 NLRP14Q86W24 1093 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 CPNE8Q86YQ8 564 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 KATNAL2Q8IYT4 538 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 RCOR2Q8IZ40 523 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 MNS1Q8NEH6 495 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 GRIN3AQ8TCU5 1115 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 KLK6Q92876 244 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 FAM131CQ96AQ9 280 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 TBC1D31Q96DN5 1066 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 RBM41Q96IZ5 413 aaKnown RBP17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 CCDC114Q96M63 670 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 PEBP4Q96S96 227 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 L2HGDHQ9H9P8 463 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 PCOLCE2Q9UKZ9 415 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 PACSIN2Q9UNF0 486 aaPredicted RBP17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 NEU3Q9UQ49 428 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 BTBD3Q9Y2F9 522 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 CHD5Q8TDI0 1954 aa17.33■□□□□ 0.36
PRPF40A-204ENST00000450303 A0A1W2PR77 199 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 SLC7A4O43246 635 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 ZNF821O75541 412 aaPredicted RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 URI1O94763 535 aaPredicted RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 CD160O95971 181 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 KRT1P04264 644 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 ZNF883P0CG24 379 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 TCF4P15884 667 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 CD38P28907 300 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 HTR7P34969 479 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 ARL4AP40617 200 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 RECQLP46063 649 aaPredicted RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 SERPINH1P50454 418 aaKnown RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 CLCN6P51797 869 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 CDH6P55285 790 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 TAS2R38P59533 333 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 HNRNPDQ14103 355 aaKnown RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 PRPF39Q86UA1 669 aaKnown RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 CHCHD4Q8N4Q1 142 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 PNPLA1Q8N8W4 532 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 TMIEQ8NEW7 156 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 EXD1Q8NHP7 514 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 RHBDD1Q8TEB9 315 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 ARHGEF2Q92974 986 aaKnown RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 EPAS1Q99814 870 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 TMEM248Q9NWD8 314 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 IL36AQ9UHA7 158 aa17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 MAP1BP46821 2468 aaKnown RBP17.32■□□□□ 0.36
PRPF40A-204ENST00000450303 LRRD1A4D1F6 860 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 C1QTNF9BB2RNN3 333 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 H3BRJ5 948 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 ENC1O14682 589 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 DDX3YO15523 660 aaKnown RBP17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 LATO43561 262 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 CREB3O43889 395 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 RNGTTO60942 597 aaKnown RBP17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 CBFA2T3O75081 653 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 LEFTY1O75610 366 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 C1QTNF9P0C862 333 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 KDELR1P24390 212 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 L1CAMP32004 1257 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 MAPKAPK2P49137 400 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 PEX5P50542 639 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 COPS2P61201 443 aa17.31■□□□□ 0.36
PRPF40A-204ENST00000450303 SLC20A2Q08357 652 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms