RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 EIF2B5Q13144 721 aaKnown RBP8.06□□□□□ -1.12
LINC01961-201ENST00000449954 C16orf72Q14CZ0 275 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 ANKRD1Q15327 319 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 ELOCQ15369 112 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 INPP5JQ15735 1006 aaPredicted RBP8.06□□□□□ -1.12
LINC01961-201ENST00000449954 ZNF699Q32M78 642 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 PLA2G4EQ3MJ16 856 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 MAP9Q49MG5 647 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 KIAA1161Q6NSJ0 714 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 LINC00114Q6XXX2 140 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 RBFAQ8N0V3 343 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 NLGN4XQ8N0W4 816 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 NLGN4YQ8NFZ3 816 aaPredicted RBP8.06□□□□□ -1.12
LINC01961-201ENST00000449954 PCDH19Q8TAB3 1148 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 CALML4Q96GE6 196 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 RPL10LQ96L21 214 aaKnown RBP8.06□□□□□ -1.12
LINC01961-201ENST00000449954 TEFMQ96QE5 360 aaKnown RBP8.06□□□□□ -1.12
LINC01961-201ENST00000449954 PCIF1Q9H4Z3 704 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 BRD7Q9NPI1 651 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.06□□□□□ -1.12
LINC01961-201ENST00000449954 ZFR2Q9UPR6 939 aaKnown RBP8.06□□□□□ -1.12
LINC01961-201ENST00000449954 UNC13CQ8NB66 2214 aa8.06□□□□□ -1.12
LINC01961-201ENST00000449954 AGRPO00253 132 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 PIK3R2O00459 728 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 FPGTO14772 594 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 MCF2LO15068 1137 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 CLSTN1O94985 981 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 PCDH8O95206 1070 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 GCNT3O95395 438 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 DLATP10515 647 aaKnown RBP8.05□□□□□ -1.12
LINC01961-201ENST00000449954 CCL4P13236 92 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 VAV1P15498 845 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 GLB1P16278 677 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 TSHRP16473 764 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 ZNF18P17022 549 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 GAP43P17677 238 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 ITGA3P26006 1051 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 STK19P49842 368 aaPredicted RBP8.05□□□□□ -1.12
LINC01961-201ENST00000449954 BLKP51451 505 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 NDST1P52848 882 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 THOP1P52888 689 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 PMS2P54278 862 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 PER3P56645 1201 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 RPS21P63220 83 aaKnown RBP8.05□□□□□ -1.12
LINC01961-201ENST00000449954 GUCY1B3Q02153 619 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 ABHD18Q0P651 414 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 C1orf61Q13536 156 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SLC12A1Q13621 1099 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 CLPPQ16740 277 aaPredicted RBP8.05□□□□□ -1.12
LINC01961-201ENST00000449954 ZNF667Q5HYK9 610 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SEL1L3Q68CR1 1132 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 C16orf46Q6P387 395 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 RFWD3Q6PCD5 774 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SCARA5Q6ZMJ2 495 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SPRED1Q7Z699 444 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 CBWD2Q8IUF1 395 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 UNC45BQ8IWX7 931 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 CARNMT1Q8N4J0 409 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 C12orf29Q8N999 325 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 DENND6BQ8NEG7 585 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 FRS2Q8WU20 508 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 LARP4BQ92615 738 aaKnown RBP8.05□□□□□ -1.12
LINC01961-201ENST00000449954 RAD54LQ92698 747 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 C8orf76Q96K31 380 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 AK8Q96MA6 479 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SLC30A3Q99726 388 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 DDX50Q9BQ39 737 aaKnown RBP8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SLC17A9Q9BYT1 436 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 CLPBQ9H078 707 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SUV39H2Q9H5I1 410 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 DYRK4Q9NR20 520 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 OLFML3Q9NRN5 406 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 SIRPGQ9P1W8 387 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 STIM2Q9P246 746 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 PILRAQ9UKJ1 303 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 POLHQ9Y253 713 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 B3GALT1Q9Y5Z6 326 aa8.05□□□□□ -1.12
LINC01961-201ENST00000449954 GNB5O14775 395 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 MSTNO14793 375 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 LRCH4O75427 683 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 LUC7L3O95232 432 aaKnown RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 CPNE6O95741 557 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 FGF3P11487 239 aaPredicted RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 DRD2P14416 443 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 IDEP14735 1019 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 MAN1A1P33908 653 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 HDAC4P56524 1084 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 PFN3P60673 137 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 TRA2AQ13595 282 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 ARHGAP44Q17R89 818 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 FAM133BQ5BKY9 247 aaKnown RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 DCAF12Q5T6F0 453 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 SP5Q6BEB4 398 aaPredicted RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 MACC1Q6ZN28 852 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 PIM3Q86V86 326 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 AGBL5Q8NDL9 886 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 RNF139Q8WU17 664 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 ERCC4Q92889 916 aaPredicted RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 ART4Q93070 314 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms