RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ASB2Q96Q27 587 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 FMO2Q99518 471 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 FICDQ9BVA6 458 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 ZDHHC6Q9H6R6 413 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 LRRC40Q9H9A6 602 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 EIF2B3Q9NR50 452 aaKnown RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 PIH1D1Q9NWS0 290 aaKnown RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 CACNA2D2Q9NY47 1150 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 K7EQS6 105 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 GSRP00390 522 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 BMP1P13497 986 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 GLULP15104 373 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 TIE1P35590 1138 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 GRIA1P42261 906 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 IL12RB1P42701 662 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 MAGEA6P43360 314 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 CCNHP51946 323 aaPredicted RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 WNT3AP56704 352 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 CAV1Q03135 178 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 NSUN2Q08J23 767 aaKnown RBP eCLIP14.81□□□□□ -0.04
TNF-208ENST00000449264 MPP3Q13368 585 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 IHHQ14623 411 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 CARD16Q5EG05 197 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 TMEM196Q5HYL7 178 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 KCTD11Q693B1 232 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 PPP1R21Q6ZMI0 780 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 DPY19L3Q6ZPD9 716 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 CCDC25Q86WR0 208 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 FRS2Q8WU20 508 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 FAM3CQ92520 227 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 MSANTD3Q96H12 275 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 NSMCE3Q96MG7 304 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 ACOX2Q99424 681 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 ARHGEF3Q9NR81 526 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 MTRF1LQ9UGC7 380 aaKnown RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 FBXL21Q9UKT6 434 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 RAB21Q9UL25 225 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 HCN2Q9UL51 889 aa14.81□□□□□ -0.04
TNF-208ENST00000449264 NDRG2Q9UN36 371 aaKnown RBP14.81□□□□□ -0.04
TNF-208ENST00000449264 ERI2A8K979 691 aaKnown RBP14.8□□□□□ -0.04
TNF-208ENST00000449264 WASH3PC4AMC7 463 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 PIGNO95427 931 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 DRD1P21728 446 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 PRKCHP24723 683 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 WASP42768 502 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 TNFRSF4P43489 277 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 TNNT3P45378 269 aaPredicted RBP14.8□□□□□ -0.04
TNF-208ENST00000449264 AP1S1P61966 158 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 C2orf27AQ580R0 203 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 NCEH1Q6PIU2 408 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 KDELC1Q6UW63 502 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 CCNI2Q6ZMN8 369 aaPredicted RBP14.8□□□□□ -0.04
TNF-208ENST00000449264 CHPFQ8IZ52 775 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 PAF1Q8N7H5 531 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 GRIN3AQ8TCU5 1115 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 PDCD6IPQ8WUM4 868 aaKnown RBP14.8□□□□□ -0.04
TNF-208ENST00000449264 IFT43Q96FT9 208 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 MRGPRX2Q96LB1 330 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 SERPINB12Q96P63 405 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 TBL1YQ9BQ87 522 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 VPS45Q9NRW7 570 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 THAP10Q9P2Z0 257 aaPredicted RBP14.8□□□□□ -0.04
TNF-208ENST00000449264 PCDHGC4Q9Y5F7 938 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 MYLKQ15746 1914 aa14.8□□□□□ -0.04
TNF-208ENST00000449264 CKAP5Q14008 2032 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 PSMD3O43242 534 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 AGTP01019 485 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 TUBBP07437 444 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 CES1P23141 567 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 MAPK8P45983 427 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 VASPP50552 380 aaPredicted RBP14.79□□□□□ -0.04
TNF-208ENST00000449264 SARNPP82979 210 aaKnown RBP14.79□□□□□ -0.04
TNF-208ENST00000449264 CDK16Q00536 496 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 TRAF2Q12933 501 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 HIF1AQ16665 826 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 NAPEPLDQ6IQ20 393 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 ZNF534Q76KX8 674 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 ZCCHC9Q8N567 271 aaKnown RBP14.79□□□□□ -0.04
TNF-208ENST00000449264 CHST14Q8NCH0 376 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 OR52K1Q8NGK4 314 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 OR2A12Q8NGT7 310 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 FAM129AQ9BZQ8 928 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 STARD13Q9Y3M8 1113 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 RAI2Q9Y5P3 530 aa14.79□□□□□ -0.04
TNF-208ENST00000449264 EDDM13A0A1B0GTR0 161 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 SHISA7A6NL88 538 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 SMAPO00193 183 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 AVILO75366 819 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 BANF1O75531 89 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 SUN1O94901 812 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 EPHX1P07099 455 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 FAM153BP0C7A2 387 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 KIR2DL1P43626 348 aaPredicted RBP14.78□□□□□ -0.04
TNF-208ENST00000449264 CHRNA4P43681 627 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 CSNK1DP48730 415 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 ARL4CP56559 192 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 GALNT3Q14435 633 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 MYLK3Q32MK0 819 aa14.78□□□□□ -0.04
TNF-208ENST00000449264 HNRNPA1L2Q32P51 320 aaKnown RBP14.78□□□□□ -0.04
TNF-208ENST00000449264 FAM153CQ494X1 144 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms