RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 DEUP1Q05D60 604 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 CNTN1Q12860 1018 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 DNAJC3Q13217 504 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 SLC25A52Q3SY17 297 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 BRMS1LQ5PSV4 323 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 AGBL4Q5VU57 503 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 TXNRD3NBQ6F5E7 133 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 FAM131BQ86XD5 332 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 SPATS2Q86XZ4 545 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 FNIP1Q8TF40 1166 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 NT5C3BQ969T7 300 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 KLHDC7BQ96G42 594 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 PEBP4Q96S96 227 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 C2orf49Q9BVC5 232 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 MAGEB5Q9BZ81 275 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 SIK2Q9H0K1 926 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 MUC3BQ9H195 1237 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 GPATCH2LQ9NWQ4 482 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 HS3ST2Q9Y278 367 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 TRPM6Q9BX84 2022 aa14.02□□□□□ -0.17
PDLIM2-213ENST00000448520 I6L893 689 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 CBX4O00257 560 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 FTCDO95954 541 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 TNNT1P13805 278 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 COMTP21964 271 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 MAT2AP31153 395 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 GJC1P36383 396 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 CLCN6P51797 869 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 METAP1P53582 386 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 RTP5Q14D33 572 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 LRRC31Q6UY01 552 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 Q6ZVU0 165 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 KANSL1Q7Z3B3 1105 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 BNIPLQ7Z465 357 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 SETD3Q86TU7 594 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 TXLNBQ8N3L3 684 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 CCDC185Q8N715 623 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 LRRC57Q8N9N7 239 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 ATP11CQ8NB49 1132 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 TMIEQ8NEW7 156 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 OR52K2Q8NGK3 314 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 FAM174AQ8TBP5 190 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 PGAP3Q96FM1 320 aaPredicted RBP14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 C1orf74Q96LT6 269 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 ARHGEF38Q9NXL2 777 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 PCSK1NQ9UHG2 260 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 SNX10Q9Y5X0 201 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 AK5Q9Y6K8 562 aa14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 NYNRINQ9P2P1 1898 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-213ENST00000448520 EIF4E1BA6NMX2 242 aaKnown RBP14□□□□□ -0.17
PDLIM2-213ENST00000448520 DRGXA6NNA5 263 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 LRCH4O75427 683 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 PRNPP04156 253 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 RHOCP08134 193 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 ACP1P24666 158 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 IL1R2P27930 398 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 MIPP30301 263 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 CHRNA3P32297 505 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 GGCXP38435 758 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 SSR1P43307 286 aaKnown RBP14□□□□□ -0.17
PDLIM2-213ENST00000448520 MARCKSL1P49006 195 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 CXCR3P49682 368 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 NUMBP49757 651 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 SLC20A2Q08357 652 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 TARDBPQ13148 414 aaKnown RBP eCLIP14□□□□□ -0.17
PDLIM2-213ENST00000448520 ZNF211Q13398 564 aaPredicted RBP14□□□□□ -0.17
PDLIM2-213ENST00000448520 PIGHQ14442 188 aaPredicted RBP14□□□□□ -0.17
PDLIM2-213ENST00000448520 HES3Q5TGS1 186 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 SCYL2Q6P3W7 929 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 LRRC69Q6ZNQ3 347 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 CYP4V2Q6ZWL3 525 aaPredicted RBP14□□□□□ -0.17
PDLIM2-213ENST00000448520 C14orf80Q86SX3 495 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 DAAM2Q86T65 1068 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 NIPA2Q8N8Q9 360 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 CENPIQ92674 756 aaPredicted RBP14□□□□□ -0.17
PDLIM2-213ENST00000448520 TKTL2Q9H0I9 626 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 DYRK4Q9NR20 520 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 KLHL11Q9NVR0 708 aa14□□□□□ -0.17
PDLIM2-213ENST00000448520 PACSIN2Q9UNF0 486 aaPredicted RBP14□□□□□ -0.17
PDLIM2-213ENST00000448520 SLC31A1O15431 190 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 RRP8O43159 456 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 BNIP3LO60238 219 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 ENDOD1O94919 500 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 SRCP12931 536 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 AKT2P31751 481 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 ABCG1P45844 678 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 RECQLP46063 649 aaPredicted RBP13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 TAS2R38P59533 333 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 SMTNL2Q2TAL5 461 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 POM121L1PQ3SYA9 428 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 ATP13A4Q4VNC1 1196 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 ZNF569Q5MCW4 686 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 PIP5KL1Q5T9C9 394 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 C11orf63Q6NUN7 778 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 STRADAQ7RTN6 431 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 HORMAD1Q86X24 394 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 DCP2Q8IU60 420 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 SLC35F6Q8N357 371 aa13.99□□□□□ -0.17
PDLIM2-213ENST00000448520 TMEM145Q8NBT3 493 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms