RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 ZRANB2O95218 330 aaKnown RBP eCLIP14.34□□□□□ -0.112e-7■■■□□ 14.8
SREBF1-207ENST00000447641 POP4O95707 220 aaKnown RBP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 IL1BP01584 269 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 PRNPP04156 253 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 ACSL1P33121 698 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 GARSP41250 739 aaKnown RBP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 RECQLP46063 649 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 PSMD8P48556 350 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 CSNK1DP48730 415 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 CCNHP51946 323 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 SNRPD1P62314 119 aaKnown RBP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 TUBB4BP68371 445 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 GBE1Q04446 702 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 NSUN2Q08J23 767 aaKnown RBP eCLIP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 ARSIQ5FYB1 569 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 PSAPL1Q6NUJ1 521 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 SYT10Q6XYQ8 523 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 SPOCD1Q6ZMY3 1216 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 ZNF354CQ86Y25 554 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 CACUL1Q86Y37 369 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 TMEFF1Q8IYR6 380 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 LRIG1Q96JA1 1093 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 CPEB1Q9BZB8 566 aaKnown RBP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 SGK2Q9HBY8 427 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 DTLQ9NZJ0 730 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 HECAQ9UBI9 543 aaPredicted RBP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 IL36AQ9UHA7 158 aa14.34□□□□□ -0.11
SREBF1-207ENST00000447641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
SREBF1-207ENST00000447641 BCLAF3A2AJT9 711 aaKnown RBP14.33□□□□□ -0.12
SREBF1-207ENST00000447641 CCDC66A2RUB6 948 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 C1QTNF3-AMACRE9PGA6 284 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 BNIP3LO60238 219 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 LEFTY1O75610 366 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 TOP3BO95985 862 aaKnown RBP14.33□□□□□ -0.12
SREBF1-207ENST00000447641 ZFXP17010 805 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-207ENST00000447641 PTGER3P43115 390 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 DNA2P51530 1060 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 COPS2P61201 443 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 RPL6Q02878 288 aaKnown RBP14.33□□□□□ -0.12
SREBF1-207ENST00000447641 SLC10A7Q0GE19 358 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 COL9A2Q14055 689 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-207ENST00000447641 TFDP3Q5H9I0 405 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 ZFYVE27Q5T4F4 411 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 ATXN7L2Q5T6C5 722 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-207ENST00000447641 TMCO4Q5TGY1 634 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 UNQ6494/PRO21346Q6UXR6 183 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 SLC41A1Q8IVJ1 513 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 HDDC3Q8N4P3 179 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 TEX26Q8N6G2 289 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 MAML1Q92585 1016 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 ALG3Q92685 438 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 GDAP1L1Q96MZ0 367 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 PSKH2Q96QS6 385 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 GPR174Q9BXC1 333 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 HDAC8Q9BY41 377 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 TM6SF2Q9BZW4 377 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 SP110Q9HB58 689 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 ZMIZ1Q9ULJ6 1067 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 NCKAP1Q9Y2A7 1128 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 EFR3BQ9Y2G0 817 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 PCDHGA5Q9Y5G8 931 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 CAPN6Q9Y6Q1 641 aa14.33□□□□□ -0.12
SREBF1-207ENST00000447641 ASCC3Q8N3C0 2202 aaKnown RBP14.32□□□□□ -0.12
SREBF1-207ENST00000447641 hCG_1818297A0A087WSY0 165 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 A0A1W2PP55 124 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 METTL12A8MUP2 240 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 MUSKO15146 869 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 SLC7A4O43246 635 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 NDUFS2O75306 463 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 RNASEH2AO75792 299 aaKnown RBP14.32□□□□□ -0.12
SREBF1-207ENST00000447641 SPINK2P20155 84 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 CCNCP24863 283 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 PTPN7P35236 360 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 RHOAP61586 193 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 ADCY2Q08462 1091 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 CNTN1Q12860 1018 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 LBRQ14739 615 aaKnown RBP14.32□□□□□ -0.12
SREBF1-207ENST00000447641 PPP2R5EQ16537 467 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 PIP5KL1Q5T9C9 394 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 AGBL4Q5VU57 503 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 PEAR1Q5VY43 1037 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-207ENST00000447641 FAM124AQ86V42 546 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 ATPAF2Q8N5M1 289 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 TSEN2Q8NCE0 465 aaKnown RBP14.32□□□□□ -0.12
SREBF1-207ENST00000447641 DNASE2BQ8WZ79 361 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 ARRDC3Q96B67 414 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 HDAC11Q96DB2 347 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 HES6Q96HZ4 224 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 RBM41Q96IZ5 413 aaKnown RBP14.32□□□□□ -0.12
SREBF1-207ENST00000447641 OLFM3Q96PB7 478 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 OMDQ99983 421 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 EDEM2Q9BV94 578 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 MAK16Q9BXY0 300 aaKnown RBP14.32□□□□□ -0.12
SREBF1-207ENST00000447641 BTBD1Q9H0C5 482 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 KDM4CQ9H3R0 1056 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 AMFRQ9UKV5 643 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 PI4KAP42356 2102 aa14.32□□□□□ -0.12
SREBF1-207ENST00000447641 MIF4GDA9UHW6 222 aaKnown RBP14.31□□□□□ -0.12
SREBF1-207ENST00000447641 PLK4O00444 970 aa14.31□□□□□ -0.12
SREBF1-207ENST00000447641 APOL1O14791 398 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms