RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 SOX5P35711 763 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 CAP2P40123 477 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 MLLT3P42568 568 aaPredicted RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 XKR9Q5GH70 373 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 FAM209AQ5JX71 171 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 TYW3Q6IPR3 259 aaKnown RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 FOXP4Q8IVH2 680 aaPredicted RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 CDKL3Q8IVW4 592 aaPredicted RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 CADM3Q8N126 398 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 OR2W6PQ8NHA6 318 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 PSMA8Q8TAA3 256 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 INTS12Q96CB8 462 aaKnown RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 SERPINB11Q96P15 392 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 NEDD4LQ96PU5 975 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 ATP13A1Q9HD20 1204 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 SPAG4Q9NPE6 437 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 KCNH7Q9NS40 1196 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 CNOT8Q9UFF9 292 aaKnown RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 NDRG3Q9UGV2 375 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 TTC3P53804 2025 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 DCCP43146 1447 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 A0A0D9SFI3 127 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 FAM155AB1AL88 458 aaPredicted RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 HUS1O60921 280 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 RBP3P10745 1247 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 WARSP23381 471 aaKnown RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 HAAOP46952 286 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 PRAMEP78395 509 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 PRKCDQ05655 676 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 SNAPC2Q13487 334 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 C1DQ13901 141 aaKnown RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 SETMARQ53H47 684 aaPredicted RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 FBXO48Q5FWF7 155 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 PDZD4Q76G19 769 aaPredicted RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 KRT26Q7Z3Y9 468 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 DNAJB7Q7Z6W7 309 aaPredicted RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 SLC9B2Q86UD5 537 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 PPIL6Q8IXY8 311 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 TTC8Q8TAM2 541 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 RDH11Q8TC12 318 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 LARP4BQ92615 738 aaKnown RBP2.95□□□□□ -1.94
CHD9-203ENST00000447540 RBBP8Q99708 897 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 ZCWPW1Q9H0M4 648 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 MROH8Q9H579 483 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 ZDHHC18Q9NUE0 388 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 SAGE1Q9NXZ1 904 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 WWOXQ9NZC7 414 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 SLC9A2Q9UBY0 812 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 FPGT-TNNI3KV9GXZ4 949 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 MAP3K4Q9Y6R4 1608 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 ZNF804BA4D1E1 1349 aa2.95□□□□□ -1.94
CHD9-203ENST00000447540 SLIT1O75093 1534 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 F8W036 122 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 SULT1C2O00338 296 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 BACH1O14867 736 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 REM1O75628 298 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 RECQL5O94762 991 aaPredicted RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 RETP07949 1114 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 NUDT7P0C024 238 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 BMP2P12643 396 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 CYP7A1P22680 504 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 ARCN1P48444 511 aaKnown RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 BTKQ06187 659 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 ELP6Q0PNE2 266 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 KCNAB1Q14722 419 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 TAF12Q16514 161 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 METAP1DQ6UB28 335 aaPredicted RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 RNF19BQ6ZMZ0 732 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 ETV3LQ6ZN32 361 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 EEPD1Q7L9B9 569 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 ZBTB33Q86T24 672 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 FAM124AQ86V42 546 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 ZDHHC13Q8IUH4 622 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 SLFN12Q8IYM2 578 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 RHOXF1Q8NHV9 184 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 PMM1Q92871 262 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 TCEAL4Q96EI5 215 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 FRMD6Q96NE9 622 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 RBM14Q96PK6 669 aaKnown RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 PITHD1Q9GZP4 211 aaPredicted RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 HOXD1Q9GZZ0 328 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 C3orf14Q9HBI5 128 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 ADA2Q9NZK5 511 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 DNAJB9Q9UBS3 223 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 AP1M2Q9Y6Q5 423 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 PI4KAP2A4QPH2 592 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 LRRC72A6NJI9 287 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 KBTBD13C9JR72 458 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 IRS4O14654 1257 aaPredicted RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 CHP2O43745 196 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 ITGAVP06756 1048 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 DBTP11182 482 aaKnown RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 MYF6P23409 242 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 GBX2P52951 348 aaPredicted RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 CHRNB3Q05901 458 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 PPARAQ07869 468 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 DSC3Q14574 896 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 SEL1L3Q68CR1 1132 aa2.94□□□□□ -1.94
CHD9-203ENST00000447540 CCBE1Q6UXH8 406 aaPredicted RBP2.94□□□□□ -1.94
CHD9-203ENST00000447540 UNC5CLQ8IV45 518 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms