RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 HS3ST3A1Q9Y663 406 aa19.1■□□□□ 0.65
ATPAF2-201ENST00000444058 SSU72P8A0A1W2PR75 194 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 FAM221BA6H8Z2 402 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 H3BRJ5 948 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 MYO1FO00160 1098 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 UGT2B4P06133 528 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 GKP32189 559 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 ARL4AP40617 200 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 CSNK1DP48730 415 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 PAPOLAP51003 745 aaKnown RBP19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 RFTN1Q14699 578 aaPredicted RBP19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 CYTH1Q15438 398 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 SHBQ15464 509 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 ATXN7L2Q5T6C5 722 aaPredicted RBP19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 SEL1L3Q68CR1 1132 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 SPATS2Q86XZ4 545 aaKnown RBP19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 VSTM4Q8IW00 320 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 ARHGAP12Q8IWW6 846 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 SAP25Q8TEE9 199 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 ADAMTS14Q8WXS8 1223 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 CELF6Q96J87 481 aaKnown RBP19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 KLHL32Q96NJ5 620 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 C1QTNF2Q9BXJ5 285 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 SLC17A9Q9BYT1 436 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 LHX3Q9UBR4 397 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 LCMT1Q9UIC8 334 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 NEUROG3Q9Y4Z2 214 aa19.09■□□□□ 0.65
ATPAF2-201ENST00000444058 J3KR12 359 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 AREL1O15033 823 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 DKK1O94907 266 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 TPM1P09493 284 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 FTH1P19P0C7X4 201 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 RARAP10276 462 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 PRLRP16471 622 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 EPHA8P29322 1005 aaPredicted RBP19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 EIF4A3P38919 411 aaKnown RBP19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 ASTE1Q2TB18 679 aaPredicted RBP19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 POLNQ7Z5Q5 900 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 RAB44Q7Z6P3 723 aaPredicted RBP19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 ABI3BPQ7Z7G0 1075 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 DCP2Q8IU60 420 aaKnown RBP19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 NPWQ8N729 165 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 LENG8Q96PV6 779 aaPredicted RBP19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 SCNM1Q9BWG6 230 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 ZNHIT6Q9NWK9 470 aaKnown RBP19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 UVRAGQ9P2Y5 699 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 BTBD3Q9Y2F9 522 aa19.08■□□□□ 0.64
ATPAF2-201ENST00000444058 TMEM131Q92545 1883 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 TNFSF14O43557 240 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 ITGAVP06756 1048 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 TCF4P15884 667 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 ABL2P42684 1182 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 SLC25A11Q02978 314 aaKnown RBP19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 IL10RBQ08334 325 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 NSUN2Q08J23 767 aaKnown RBP eCLIP19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 TSR1Q2NL82 804 aaKnown RBP19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 PRAMEF14Q5SWL7 426 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 TTC7BQ86TV6 843 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 ZNF641Q96N77 438 aaPredicted RBP19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 ZNF599Q96NL3 588 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 TUBGCP5Q96RT8 1024 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 RCOR3Q9P2K3 495 aaPredicted RBP19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 EPG5Q9HCE0 2579 aa19.07■□□□□ 0.64
ATPAF2-201ENST00000444058 TSPAN11A1L157 253 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 NEMP1O14524 444 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 HYAL3O43820 417 aaPredicted RBP19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 PALMO75781 387 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 PAK4O96013 591 aaPredicted RBP19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 H2AFZP0C0S5 128 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 THEGLP0DJG4 465 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 IL9RQ01113 521 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 SGCGQ13326 291 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 HADHQ16836 314 aaKnown RBP19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 SMTNL2Q2TAL5 461 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 TMCO4Q5TGY1 634 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 TMCO3Q6UWJ1 677 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 H2AFVQ71UI9 128 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 RNF214Q8ND24 703 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 DENND6BQ8NEG7 585 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 ZNF564Q8TBZ8 553 aaPredicted RBP19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 FAM71BQ8TC56 605 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 CTNNBL1Q8WYA6 563 aaPredicted RBP19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 TSC1Q92574 1164 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 HSPH1Q92598 858 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 KLK6Q92876 244 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 IFT43Q96FT9 208 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 CSPG4P5Q96PW8 444 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 SP110Q9HB58 689 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 GPR27Q9NS67 375 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 ABHD10Q9NUJ1 306 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 KLHL11Q9NVR0 708 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 TOR4AQ9NXH8 423 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 IPO11Q9UI26 975 aaKnown RBP19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 CA5BQ9Y2D0 317 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 MSRB2Q9Y3D2 182 aa19.06■□□□□ 0.64
ATPAF2-201ENST00000444058 A6NNZ2 444 aa19.05■□□□□ 0.64
ATPAF2-201ENST00000444058 DFFAO00273 331 aa19.05■□□□□ 0.64
ATPAF2-201ENST00000444058 SPINT1O43278 529 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms