RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 PCDHB18PQ96TA0 734 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 KLF6Q99612 283 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 EIF3CQ99613 913 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 EPAS1Q99814 870 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 TM6SF2Q9BZW4 377 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 TTYH3Q9C0H2 523 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 CATSPERBQ9H7T0 1116 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 UCKL1Q9NWZ5 548 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 DNAJC28Q9NX36 388 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 DKK3Q9UBP4 350 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 IPO11Q9UI26 975 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 MYO6Q9UM54 1294 aa16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 ARID1BQ8NFD5 2236 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-204ENST00000443891 ATRXP46100 2492 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 POM121BA6NF01 834 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 KRIT1O00522 736 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 AREL1O15033 823 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 FGF10O15520 208 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 BUB1O43683 1085 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 IGSF6O95976 241 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 CDK11BP21127 795 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 EPHB2P29323 1055 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 ACTN2P35609 894 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 PFN3P60673 137 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 UBXN1Q04323 297 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 ZCCHC8Q6NZY4 707 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 GDPD4Q6W3E5 623 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 CCDC185Q8N715 623 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 TPCN2Q8NHX9 752 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 FGF11Q92914 225 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 VCPIP1Q96JH7 1222 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 APOLD1Q96LR9 279 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 DEPDC7Q96QD5 511 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 AGPAT1Q99943 283 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 CNPY3Q9BT09 278 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 CPEB1Q9BZB8 566 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 SALL4Q9UJQ4 1053 aa16.56■□□□□ 0.24
CTDSP1-204ENST00000443891 TCRBV5S1A1TA0A578 114 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 IGLON5A6NGN9 336 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 K7ESM1 405 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 FERP16591 822 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 ABL2P42684 1182 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 ACAP1Q15027 740 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 STX1AQ16623 288 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 SOWAHCQ53LP3 525 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 RAB6CQ53S08 254 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 CDCP2Q5VXM1 449 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 DNAJC24Q6P3W2 148 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 TTC7BQ86TV6 843 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 UMODL1-AS1Q8N2C9 162 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 RAB6CQ9H0N0 254 aa16.55■□□□□ 0.24
CTDSP1-204ENST00000443891 RAD51BO15315 384 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 FFAR2O15552 330 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 AQP9O43315 295 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 OPA1O60313 960 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 TMCC1O94876 653 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 UGT2B4P06133 528 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 HOXB3P14651 431 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 SEMG2Q02383 582 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 ELP6Q0PNE2 266 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 SERINC3Q13530 473 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 COL9A2Q14055 689 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 PDE1CQ14123 709 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 PPP1R15BQ5SWA1 713 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 PHLDB2Q86SQ0 1253 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 ZNF548Q8NEK5 533 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 WDR48Q8TAF3 677 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 CXorf40AQ8TE69 158 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 GLMNQ92990 594 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 CENPTQ96BT3 561 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 ZNF578Q96N58 590 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 KLHL32Q96NJ5 620 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 SPASTQ9UBP0 616 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 FZD10Q9ULW2 581 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 ACTL7AQ9Y615 435 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 CHD5Q8TDI0 1954 aa16.54■□□□□ 0.24
CTDSP1-204ENST00000443891 TRPM6Q9BX84 2022 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 LAMA5O15230 3695 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 ITPR1Q14643 2758 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 TMEM110-MUSTN1A8MSY1 372 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 RASA4BC9J798 803 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 CCP110O43303 1012 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 RASA4O43374 803 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 TM7SF2O76062 418 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 DXOO77932 396 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 JUNDP17535 347 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 RPIAP49247 311 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 PEX5P50542 639 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 ZNF135P52742 658 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 NDST2P52849 883 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 THOP1P52888 689 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 CLDN6P56747 220 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 RHOAP61586 193 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 TBC1D25Q3MII6 688 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 ACAD10Q6JQN1 1059 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 SCYL2Q6P3W7 929 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 DCUN1D2Q6PH85 259 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 TMC6Q7Z403 805 aa16.53■□□□□ 0.24
CTDSP1-204ENST00000443891 ZNF354CQ86Y25 554 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms