RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DHTKD1Q96HY7 919 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-208ENST00000443046 GTPBP4Q9BZE4 634 aaKnown RBP14.64□□□□□ -0.07
HMGN1-208ENST00000443046 WDCPQ9H6R7 721 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 UBE2TQ9NPD8 197 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-208ENST00000443046 MPP6Q9NZW5 540 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 PCDHGC3Q9UN70 934 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 SNX10Q9Y5X0 201 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 NBASA2RRP1 2371 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 C16orf96A6NNT2 1141 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 D6RAR5 112 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 TOR1BO14657 336 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 PSMA7O14818 248 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 AREL1O15033 823 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 ERBB2P04626 1255 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 CELA2BP08218 269 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 CD44P16070 742 aaKnown RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 TFE3P19532 575 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 OR1E1P30953 314 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 IGFALSP35858 605 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 MARSP56192 900 aaKnown RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 SLC6A3Q01959 620 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 TBR1Q16650 682 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 ACBD5Q5T8D3 534 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 ESRP1Q6NXG1 681 aaKnown RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 LVRNQ6Q4G3 990 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 MACC1Q6ZN28 852 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 TFAP2DQ7Z6R9 452 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 ARL10Q8N8L6 244 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 ISG20Q96AZ6 181 aaKnown RBP14.63□□□□□ -0.07
HMGN1-208ENST00000443046 ARHGAP9Q9BRR9 750 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 SLC13A1Q9BZW2 595 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 EPB41L5Q9HCM4 733 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 RRN3Q9NYV6 651 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 PCDHGA4Q9Y5G9 962 aa14.63□□□□□ -0.07
HMGN1-208ENST00000443046 LRP4O75096 1905 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 HGFP14210 728 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 WT1P19544 449 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-208ENST00000443046 THOP1P52888 689 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 CCL7P80098 99 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 ZFP36L1Q07352 338 aaKnown RBP14.62□□□□□ -0.07
HMGN1-208ENST00000443046 ZNF805Q5CZA5 627 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 ENOSF1Q7L5Y1 443 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 DTX1Q86Y01 620 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 FSTL5Q8N475 847 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-208ENST00000443046 CCDC74AQ96AQ1 378 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 GFM1Q96RP9 751 aaKnown RBP14.62□□□□□ -0.07
HMGN1-208ENST00000443046 FOXP3Q9BZS1 431 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 STRADBQ9C0K7 418 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 TMPRSS4Q9NRS4 437 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 HECAQ9UBI9 543 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-208ENST00000443046 ITM2BQ9Y287 266 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 FCF1Q9Y324 198 aaKnown RBP14.62□□□□□ -0.07
HMGN1-208ENST00000443046 ACTL7AQ9Y615 435 aa14.62□□□□□ -0.07
HMGN1-208ENST00000443046 USP9XQ93008 2570 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-208ENST00000443046 SMC2O95347 1197 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 NTRK1P04629 796 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 GKP32189 559 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 EIF4A3P38919 411 aaKnown RBP14.61□□□□□ -0.07
HMGN1-208ENST00000443046 PPARDQ03181 441 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 PTPN20Q4JDL3 420 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 FAXCQ5TGI0 409 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 SMYD5Q6GMV2 418 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 LRRC31Q6UY01 552 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 BNIPLQ7Z465 357 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 JAMLQ86YT9 394 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 SDR16C5Q8N3Y7 309 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 KYQ8NBH2 561 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 TP53I13Q8NBR0 393 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-208ENST00000443046 HTR3CQ8WXA8 447 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 TMEM74Q96NL1 305 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 SPON2Q9BUD6 331 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 ZDHHC6Q9H6R6 413 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 ATP13A1Q9HD20 1204 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 MBNL1Q9NR56 388 aaKnown RBP14.61□□□□□ -0.07
HMGN1-208ENST00000443046 TMEM51Q9NW97 253 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 GEMIN8Q9NWZ8 242 aaKnown RBP14.61□□□□□ -0.07
HMGN1-208ENST00000443046 ANKMY1Q9P2S6 941 aa14.61□□□□□ -0.07
HMGN1-208ENST00000443046 LRRK1Q38SD2 2015 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 CLEC18AA5D8T8 446 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 F9P00740 461 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 RPLP0P05388 317 aaKnown RBP14.6□□□□□ -0.07
HMGN1-208ENST00000443046 PEX5P50542 639 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 DNA2P51530 1060 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 HK3P52790 923 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 GNA12Q03113 381 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 TLE1Q04724 770 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 CLCA4Q14CN2 919 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 ELOCQ15369 112 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 GJB7Q6PEY0 223 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 TRIM65Q6PJ69 517 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 CLEC18BQ6UXF7 455 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 VPS36Q86VN1 386 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 ZDHHC17Q8IUH5 632 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 PASD1Q8IV76 773 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 CLEC18CQ8NCF0 446 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 C1orf131Q8NDD1 294 aaKnown RBP14.6□□□□□ -0.07
HMGN1-208ENST00000443046 PCDH19Q8TAB3 1148 aa14.6□□□□□ -0.07
HMGN1-208ENST00000443046 SHC3Q92529 594 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms