RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TM9SF4Q92544 642 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 THAP11Q96EK4 314 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 SPAG5Q96R06 1193 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 KCNK16Q96T55 309 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 BDH2Q9BUT1 245 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 ZNF518BQ9C0D4 1074 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 COMMD8Q9NX08 183 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 GDAP2Q9NXN4 497 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 TMEM9Q9P0T7 183 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 SLCO3A1Q9UIG8 710 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 ERVW-1Q9UQF0 538 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 SNX9Q9Y5X1 595 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 LRP4O75096 1905 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 TENM1Q9UKZ4 2725 aa7.32□□□□□ -1.24
SSXP3-201ENST00000442971 OGTO15294 1046 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 SHOX2O60902 331 aaPredicted RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 CTAG2O75638 210 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 RAF1P04049 648 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 ALPPP05187 535 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 SRPRAP08240 638 aaKnown RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 SPATA31C1P0DKV0 1188 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 GARSP41250 739 aaKnown RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 TSFMP43897 325 aaKnown RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 BLKP51451 505 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 PDE1AP54750 535 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 COG7P83436 770 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 KYNUQ16719 465 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 FAM180AQ6UWF9 173 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 PAMR1Q6UXH9 720 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 NEK8Q86SG6 692 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 DMRTC2Q8IXT2 367 aaPredicted RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 SYT2Q8N9I0 419 aaPredicted RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 ADAMTS18Q8TE60 1221 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 TRIM56Q9BRZ2 755 aaKnown RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 ASB7Q9H672 318 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 ZDHHC6Q9H6R6 413 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 GPAMQ9HCL2 828 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 ZNHIT2Q9UHR6 403 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 CPSF3Q9UKF6 684 aaKnown RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 PADI1Q9ULC6 663 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 NOVA2Q9UNW9 492 aaKnown RBP7.31□□□□□ -1.24
SSXP3-201ENST00000442971 KIAA1024Q9UPX6 916 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 WASF2Q9Y6W5 498 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 HCFC1P51610 2035 aa7.31□□□□□ -1.24
SSXP3-201ENST00000442971 C1QTNF3-AMACRE9PGA6 284 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 CLDN5O00501 218 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 SLC16A4O15374 487 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 CREB3O43889 395 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 SLCO2B1O94956 709 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 MS4A1P11836 297 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 GCFC2P16383 781 aaKnown RBP7.3□□□□□ -1.24
SSXP3-201ENST00000442971 CFPP27918 469 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 MSX1P28360 303 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 PTPN4P29074 926 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
SSXP3-201ENST00000442971 CSF2RBP32927 897 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 SCNN1AP37088 669 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 CTSOP43234 321 aaPredicted RBP7.3□□□□□ -1.24
SSXP3-201ENST00000442971 TDGF1P3P51864 188 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 HK3P52790 923 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 SLC12A3P55017 1021 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 CENPCQ03188 943 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 CDC16Q13042 620 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 NKAIN2Q5VXU1 208 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 MED25Q71SY5 747 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 BCORP1Q8N888 145 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 TMEM102Q8N9M5 508 aaPredicted RBP7.3□□□□□ -1.24
SSXP3-201ENST00000442971 DNAAF3Q8N9W5 541 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 SGMS2Q8NHU3 365 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 KBTBD7Q8WVZ9 684 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 OR8D1Q8WZ84 308 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 TMA16Q96EY4 203 aaKnown RBP7.3□□□□□ -1.24
SSXP3-201ENST00000442971 RUFY1Q96T51 708 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 KLF6Q99612 283 aaPredicted RBP7.3□□□□□ -1.24
SSXP3-201ENST00000442971 DPYSL5Q9BPU6 564 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 LRRC2Q9BYS8 371 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 ADAM19Q9H013 955 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 LRTM1Q9HBL6 345 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 VPS54Q9P1Q0 977 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 LRFN1Q9P244 771 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 ADGRE2Q9UHX3 823 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 INTS6Q9UL03 887 aaKnown RBP7.3□□□□□ -1.24
SSXP3-201ENST00000442971 AGAP1Q9UPQ3 857 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 PIKFYVEQ9Y2I7 2098 aa7.3□□□□□ -1.24
SSXP3-201ENST00000442971 RHPN2P1A8MT19 583 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 A8MU76 341 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 ZBTB43O43298 467 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 ARHGEF9O43307 516 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 CCNT1O60563 726 aaKnown RBP7.29□□□□□ -1.24
SSXP3-201ENST00000442971 TACC1O75410 805 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 ATE1O95260 518 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 CD19P15391 556 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 CASP6P55212 293 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 RPS21P63220 83 aaKnown RBP7.29□□□□□ -1.24
SSXP3-201ENST00000442971 PRR20EP86478 221 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 PRR20CP86479 221 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 PRR20DP86480 221 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 PRR20BP86481 221 aa7.29□□□□□ -1.24
SSXP3-201ENST00000442971 PRR20AP86496 221 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms