RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CARTPTQ16568 116 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 RGS21Q2M5E4 152 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 SLC10A6Q3KNW5 377 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 VPS26BQ4G0F5 336 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 NAPEPLDQ6IQ20 393 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 KCTD8Q6ZWB6 473 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 CYP4V2Q6ZWL3 525 aaPredicted RBP9.15□□□□□ -0.95
COPB1-202ENST00000439561 OTOP3Q7RTS5 596 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 KRT27Q7Z3Y8 459 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 PPHLN1Q8NEY8 458 aaKnown RBP9.15□□□□□ -0.95
COPB1-202ENST00000439561 RTP4Q96DX8 246 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 NIFKQ9BYG3 293 aaKnown RBP9.15□□□□□ -0.95
COPB1-202ENST00000439561 ZNF214Q9UL59 606 aaPredicted RBP9.15□□□□□ -0.95
COPB1-202ENST00000439561 OAZ3Q9UMX2 235 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 PRSS51A0A1B0GVH4 220 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 PTGES3LE9PB15 166 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 K7EPI3 171 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 EI24O14681 340 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 PLSCR1O15162 318 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 AP1G1O43747 822 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 ENDOD1O94919 500 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 MOCS2O96007 188 aaPredicted RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 EGFRP00533 1210 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 GFAPP14136 432 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 AKAP5P24588 427 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 CXCL9Q07325 125 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 GRM1Q13255 1194 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 LAMC2Q13753 1193 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 AARS2Q5JTZ9 985 aaKnown RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 METTL7BQ6UX53 244 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 ARL10Q8N8L6 244 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 BEST2Q8NFU1 509 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 C18orf25Q96B23 403 aaPredicted RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 DCPSQ96C86 337 aaKnown RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 PLEKHA8Q96JA3 519 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 RNF145Q96MT1 663 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 PCYT2Q99447 389 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 SETD4Q9NVD3 440 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 SBF2Q86WG5 1849 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 TCAF2A6NFQ2 919 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 TOR1BO14657 336 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 MAN1A2O60476 641 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 HUS1O60921 280 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 MTHFD1P11586 935 aaKnown RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 ARF4P18085 180 aaPredicted RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 CES1P23141 567 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 RAB10P61026 200 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 CDH17Q12864 832 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 NFYCQ13952 458 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 ARL13BQ3SXY8 428 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 NCCRP1Q6ZVX7 275 aaPredicted RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 CUZD1Q86UP6 607 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 FAM35AQ86V20 835 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 PIGZQ86VD9 579 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 OR2T34Q8NGX1 318 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 OR2T3Q8NH03 318 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 NAA50Q9GZZ1 169 aaKnown RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 RBM38Q9H0Z9 239 aaKnown RBP9.14□□□□□ -0.95
COPB1-202ENST00000439561 ALG9Q9H6U8 611 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 FAIMQ9NVQ4 179 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 TNFSF13BQ9Y275 285 aa9.14□□□□□ -0.95
COPB1-202ENST00000439561 SYCE1LA8MT33 242 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 CCL22O00626 93 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 PARNO95453 639 aaKnown RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 MT-CYBP00156 380 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 ZNF26P17031 533 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 PAMP19021 973 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 CCNA2P20248 432 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SLC7A1P30825 629 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 MAP3K7CLP57077 242 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 TAS2R39P59534 338 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 NSUN2Q08J23 767 aaKnown RBP eCLIP9.13□□□□□ -0.95
COPB1-202ENST00000439561 ZBED5Q49AG3 693 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ZNF618Q5T7W0 954 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SCIMPQ6UWF3 145 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ABRAXAS1Q6UWZ7 409 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 RAB44Q7Z6P3 723 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 LDB1Q86U70 411 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 ERO1BQ86YB8 467 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 CHERPQ8IWX8 916 aaKnown RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 CENPSQ8N2Z9 138 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 TMEM102Q8N9M5 508 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 GABPB2Q8TAK5 448 aaPredicted RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 CASP10Q92851 521 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 RHOJQ9H4E5 214 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 QTRT2Q9H974 415 aaKnown RBP9.13□□□□□ -0.95
COPB1-202ENST00000439561 VPS45Q9NRW7 570 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SMOXQ9NWM0 555 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 BTRCQ9Y297 605 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 SNX5Q9Y5X3 404 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 C9IYK1 514 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 FBP2O00757 339 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ALDH1A2O94788 518 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ATE1O95260 518 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 ESRRBO95718 433 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 AP2A1O95782 977 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 INSRRP14616 1297 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 NFKBIAP25963 317 aa9.13□□□□□ -0.95
COPB1-202ENST00000439561 PTPN3P26045 913 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms