RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 ZNF662Q6ZS27 426 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 TFAP2DQ7Z6R9 452 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 TRIM69Q86WT6 500 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 SPATS2Q86XZ4 545 aaKnown RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 XYLT1Q86Y38 959 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 ZDHHC17Q8IUH5 632 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 SH2D3CQ8N5H7 860 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 SLC35G2Q8TBE7 412 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 RFFLQ8WZ73 363 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 KLHDC7BQ96G42 594 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 MYOCQ99972 504 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 NUP85Q9BW27 656 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 ERVMER34-1Q9H9K5 563 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 DYRK4Q9NR20 520 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 RRN3Q9NYV6 651 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 SALL4Q9UJQ4 1053 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 STAP1Q9ULZ2 295 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 TBC1D30Q9Y2I9 924 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 PCDHGA1Q9Y5H4 931 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 OR51B4Q9Y5P0 310 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 AK5Q9Y6K8 562 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 WDFY3Q8IZQ1 3526 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 A0A0A6YYK5 440 aaPredicted RBP9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 A0A1W2PQU0 124 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 BTNL10A8MVZ5 291 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 C10orf142B7Z368 130 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 K7ERQ8 282 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 SMAD6O43541 496 aaKnown RBP9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 BUB1O43683 1085 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 SRGAP2O75044 1071 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 SDC3O75056 442 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 ENDOD1O94919 500 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 PCDH8O95206 1070 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 GJB6O95452 261 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 F9P00740 461 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 CDK4P11802 303 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 SRCP12931 536 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 PRLRP16471 622 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 DNA2P51530 1060 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 CCDC15Q0P6D6 951 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 OVGP1Q12889 678 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 C5orf22Q49AR2 442 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 C6orf118Q5T5N4 469 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 HES3Q5TGS1 186 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 OTUD1Q5VV17 481 aaPredicted RBP9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 PLEKHA7Q6IQ23 1121 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 DNAJC24Q6P3W2 148 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 LINGO4Q6UY18 593 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 IQCHQ86VS3 1027 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 RHOT2Q8IXI1 618 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 RNF10Q8N5U6 811 aaKnown RBP9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 CHST14Q8NCH0 376 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 OR7D4Q8NG98 312 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 GRIN3AQ8TCU5 1115 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 ARRDC3Q96B67 414 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 TBCBQ99426 244 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 PSMB7Q99436 277 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 NPY6RQ99463 290 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 TNKS2Q9H2K2 1166 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 PREBQ9HCU5 417 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 ANLNQ9NQW6 1124 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 TMPRSS4Q9NRS4 437 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 PARVAQ9NVD7 372 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 ARHGEF38Q9NXL2 777 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 DKK4Q9UBT3 224 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 VPS51Q9UID3 782 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 PTPRQQ9UMZ3 2332 aa9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 TDRD6O60522 2096 aaKnown RBP9.38□□□□□ -0.91
AC011228.1-201ENST00000439027 A0A0D9SEW6 157 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 TCRBV5S1A1TA0A578 114 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 EIF4E1BA6NMX2 242 aaKnown RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 DRGXA6NNA5 263 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 E9PAM4 449 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 KIF5CO60282 957 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF500O60304 480 aaPredicted RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 PRNPP04156 253 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 CTSLP07711 333 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 THEGLP0DJG4 465 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 CKMT2P17540 419 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 OR1E1P30953 314 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 AKT2P31751 481 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 ACADVLP49748 655 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 TAS2R38P59533 333 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 GNG11P61952 73 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 DAB2P98082 770 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 SEMG2Q02383 582 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 TARDBPQ13148 414 aaKnown RBP eCLIP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 MAMLD1Q13495 774 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 IFI16Q16666 785 aaKnown RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 SLC25A52Q3SY17 297 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 PIP5KL1Q5T9C9 394 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 DCUN1D2Q6PH85 259 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 SETD3Q86TU7 594 aaPredicted RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 HORMAD1Q86X24 394 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms