RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 SHROOM1Q2M3G4 852 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 POTEHQ6S545 545 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 FAM126AQ9BYI3 521 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 NUAK2Q9H093 628 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 SPON1Q9HCB6 807 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 EGFL7Q9UHF1 273 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 BTRCQ9Y297 605 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 H3BN98 237 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 AZIN1O14977 448 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 SIN3BO75182 1162 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 MLYCDO95822 493 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 GBE1Q04446 702 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 METTL21CQ5VZV1 264 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 PLPPR4Q7Z2D5 763 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 XYLT1Q86Y38 959 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 AADATQ8N5Z0 425 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 FAM47BQ8NA70 645 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 OR52K2Q8NGK3 314 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 BSNDQ8WZ55 320 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 ATXN10Q9UBB4 475 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 NRP2O60462 931 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 CELF2O95319 508 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 PPP2R1BP30154 601 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 FOXN2P32314 431 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 CDH13P55290 713 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 ACSM2AQ08AH3 577 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 TMEM132BQ14DG7 1078 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 INO80DQ53TQ3 878 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 ACSM2BQ68CK6 577 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 SCIMPQ6UWF3 145 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 MED8Q96G25 268 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 SNX8Q9Y5X2 465 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 KPNA6O60684 536 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 WBP4O75554 376 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 CCNA2P20248 432 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 CERCAMQ5T4B2 595 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 TRIQKQ629K1 86 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 ERAP2Q6P179 960 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 SYT12Q8IV01 421 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 CYP4X1Q8N118 509 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 SELENOMQ8WWX9 145 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 TMEM159Q96B96 161 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 RMI1Q9H9A7 625 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 ARL15Q9NXU5 204 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 KANSL3Q9P2N6 904 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 ZNF180Q9UJW8 692 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 TRAF6Q9Y4K3 522 aa11.28□□□□□ -0.6
SEMA4D-211ENST00000438547 LOC100506127A0A0U1RQW1 187 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 FAM25AB3EWG3 89 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 FAM25CB3EWG5 89 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 FAM25GB3EWG6 89 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 HOXA2O43364 376 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 B4GALT4O60513 344 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 TSC22D2O75157 780 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 EPN2O95208 641 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 GJB1P08034 283 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 PSEN2P49810 448 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 MRPS5P82675 430 aaKnown RBP11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 ARHGAP15Q53QZ3 475 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 DGKKQ5KSL6 1271 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 PERM1Q5SV97 790 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 LCLAT1Q6UWP7 414 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 ARHGAP36Q6ZRI8 547 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 STRADAQ7RTN6 431 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 LRRC49Q8IUZ0 686 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 CDYL2Q8N8U2 506 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 CSPG4P5Q96PW8 444 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 B3GNT5Q9BYG0 378 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 SMPD4Q9NXE4 827 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 AHSPQ9NZD4 102 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 SLC12A4Q9UP95 1085 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 VWA7Q9Y334 891 aa11.27□□□□□ -0.6
SEMA4D-211ENST00000438547 OR56A5P0C7T3 313 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 DGKAP23743 735 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 IDH2P48735 452 aaKnown RBP11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 GRIK3Q13003 919 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 VSTM1Q6UX27 236 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 ABHD15Q6UXT9 468 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 KRT73Q86Y46 540 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 KRT78Q8N1N4 520 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 SLC4A11Q8NBS3 891 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 TRMOQ9BU70 441 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 KRCC1Q9NPI7 259 aaPredicted RBP11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 TAS2R1Q9NYW7 299 aa11.27□□□□□ -0.61
SEMA4D-211ENST00000438547 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms