RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 DDX23Q9BUQ8 820 aaKnown RBP3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 BRD8Q9H0E9 1235 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 SEPSECSQ9HD40 501 aaKnown RBP3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 DHDHQ9UQ10 334 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 SNED1Q8TER0 1413 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 ARHGEF11O15085 1522 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 LAMC3Q9Y6N6 1575 aa3.33□□□□□ -1.88
HMGB1P31-201ENST00000437242 AQP12BA6NM10 295 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 HNRNPCL2B2RXH8 293 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 P2RY10O00398 339 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 STRNO43815 780 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 PMS2P2O95744 297 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 LYL1P12980 280 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 CDK7P50613 346 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 FCN2Q15485 313 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 SETMARQ53H47 684 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 DCAF6Q58WW2 860 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 MARK2Q7KZI7 788 aaKnown RBP3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 SRLQ86TD4 932 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 KLHDC8BQ8IXV7 354 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 GALNT15Q8N3T1 639 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 ZNF485Q8NCK3 441 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 OR1N1Q8NGS0 311 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 SGCZQ96LD1 299 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 CLPBQ9H078 707 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 KLQ9UEF7 1012 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 CHD1O14646 1710 aa3.32□□□□□ -1.88
HMGB1P31-201ENST00000437242 MRC2Q9UBG0 1479 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 FAM72CH0Y354 149 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 HNRNPRO43390 633 aaKnown RBP3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 FGF17O60258 216 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 SLC22A3O75751 556 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 TFRCP02786 760 aaKnown RBP3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 SSTR2P30874 369 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 RPS6KA3P51812 740 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 ZNF132P52740 706 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 RPS6KA2Q15349 733 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 FAM72AQ5TYM5 149 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 FAM72DQ6L9T8 149 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 NFRKBQ6P4R8 1299 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 FAM72BQ86X60 149 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 BRSK2Q8IWQ3 736 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 SPICE1Q8N0Z3 855 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 AADATQ8N5Z0 425 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 STT3BQ8TCJ2 826 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 PARD3BQ8TEW8 1205 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 CPT1BQ92523 772 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 USP13Q92995 863 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 RTKNQ9BST9 563 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 EBF2Q9HAK2 575 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 GRHL1Q9NZI5 618 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 LRFN1Q9P244 771 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 BAG5Q9UL15 447 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 TCF19Q9Y242 345 aa3.31□□□□□ -1.88
HMGB1P31-201ENST00000437242 ARAP1Q96P48 1450 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 BAZ1BQ9UIG0 1483 aaKnown RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 TARSL2A2RTX5 802 aaKnown RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 EIF3JO75822 258 aaKnown RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 GAGE7O76087 117 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 VNN2O95498 520 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 CBX6O95503 412 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 ATP1A1P05023 1023 aaKnown RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 DHRS4L1P0CG22 281 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 GAGE12FP0CL80 117 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 GAGE12GP0CL81 117 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 GAGE12IP0CL82 117 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 SETSIPP0DME0 302 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 LIFRP42702 1097 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 FAM27E3Q08E93 113 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 GAGE1Q13065 139 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 GAGE4Q13068 117 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 KRT72Q14CN4 511 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 C14orf177Q52M58 125 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 RINLQ6ZS11 566 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 RAB11FIP2Q7L804 512 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 CCDC105Q8IYK2 499 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 ENAHQ8N8S7 591 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 STYXQ8WUJ0 223 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 TRIB2Q92519 343 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 PSMD1Q99460 953 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 MMTAG2Q9BU76 263 aaKnown RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 GFRA4Q9GZZ7 299 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 ELAC1Q9H777 363 aaKnown RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 MVB12BQ9H7P6 319 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 ARFGAP3Q9NP61 516 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 PLCB1Q9NQ66 1216 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 SMARCAL1Q9NZC9 954 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 FBXO40Q9UH90 709 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 C19orf53Q9UNZ5 99 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 RCE1Q9Y256 329 aa3.3□□□□□ -1.88
HMGB1P31-201ENST00000437242 MROH2BQ7Z745 1585 aa3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 ZNF608Q9ULD9 1512 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 A0A1B0GU03 582 aa3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 ABHD14A-ACY1A0A1B0GW23 586 aa3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 hDV102S1A0JD36 115 aa3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 KDM4BO94953 1096 aa3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 TNFRSF6BO95407 300 aa3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 LDHAP00338 332 aaKnown RBP3.29□□□□□ -1.88
HMGB1P31-201ENST00000437242 RNF224P0DH78 156 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms